RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 LINGO3P0C6S8 592 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 UBL4AP11441 157 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 EPXP11678 715 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 PSMA4P25789 261 aaKnown RBP13.77□□□□□ -0.21
NUP50-219ENST00000497960 MAGEA8P43361 318 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 MTPNP58546 118 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 SIRPAP78324 504 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 RGNQ15493 299 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 ZNF141Q15928 474 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 GPAT3Q53EU6 434 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 PDZK1Q5T2W1 519 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 HEPHL1Q6MZM0 1159 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 CBLN3Q6UW01 205 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 ESPNLQ6ZVH7 1005 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 FITM2Q8N6M3 262 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 TMCO5AQ8N6Q1 288 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 TOR1AIP2Q8NFQ8 470 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 OR10D3Q8NH80 312 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 OR2V1Q8NHB1 315 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 ROPN1LQ96C74 230 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 STARD4Q96DR4 205 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 ANKRD27Q96NW4 1050 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 NPAS1Q99742 590 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 POLDIP3Q9BY77 421 aaKnown RBP13.77□□□□□ -0.21
NUP50-219ENST00000497960 ZNF350Q9GZX5 532 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 TMEM185BQ9H7F4 350 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 RNF122Q9H9V4 155 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 MKLN1Q9UL63 735 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 ICAM5Q9UMF0 924 aa13.77□□□□□ -0.21
NUP50-219ENST00000497960 GPC6Q9Y625 555 aaPredicted RBP13.77□□□□□ -0.21
NUP50-219ENST00000497960 ANKRD17O75179 2603 aaKnown RBP13.76□□□□□ -0.21
NUP50-219ENST00000497960 TMEM247A6NEH6 219 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 GJE1A6NN92 205 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 A6NNC1 897 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 FXYD1O00168 92 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 ADAMDEC1O15204 470 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 OIP5O43482 229 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 FCMRO60667 390 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 PLGP00747 810 aaPredicted RBP13.76□□□□□ -0.21
NUP50-219ENST00000497960 NPPAP01160 153 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 BCHEP06276 602 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 ELK4P28324 431 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 ADH6P28332 368 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 CPOXP36551 454 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 KIR2DL2P43627 348 aaPredicted RBP13.76□□□□□ -0.21
NUP50-219ENST00000497960 CCR4P51679 360 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 MVDP53602 400 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 CBX1P83916 185 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 MXRA7P84157 204 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 FUT5Q11128 374 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 FOXF1Q12946 379 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 DAZAP2Q15038 168 aaPredicted RBP13.76□□□□□ -0.21
NUP50-219ENST00000497960 NDUFAF6Q330K2 333 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 RUNDC3AQ59EK9 446 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 GCNT6Q5T4J0 391 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 FBXW10Q5XX13 1052 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 VWA1Q6PCB0 445 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 LILRA2Q8N149 483 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 OR5W2Q8NH69 310 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 FBXO27Q8NI29 283 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 LINC01560Q8TB33 94 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 POC1BQ8TC44 478 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 GPR119Q8TDV5 335 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 LRRC58Q96CX6 371 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 KLHL15Q96M94 604 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 KLHDC3Q9BQ90 382 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 GPATCH1Q9BRR8 931 aaKnown RBP13.76□□□□□ -0.21
NUP50-219ENST00000497960 THUMPD3Q9BV44 507 aaKnown RBP13.76□□□□□ -0.21
NUP50-219ENST00000497960 IKZF5Q9H5V7 419 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 EFCAB1Q9HAE3 211 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 POLE3Q9NRF9 147 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 ARL8BQ9NVJ2 186 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 THUMPD1Q9NXG2 353 aaKnown RBP13.76□□□□□ -0.21
NUP50-219ENST00000497960 WDR45Q9Y484 360 aa13.76□□□□□ -0.21
NUP50-219ENST00000497960 TNFSF11O14788 317 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 CXCL13O43927 109 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 CYP7B1O75881 506 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 AQP8O94778 261 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 GUSBP08236 651 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 NR2F1P10589 423 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 CBFBQ13951 182 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 SELPLGQ14242 412 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 KRT72Q14CN4 511 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 CYP51A1Q16850 503 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 CTU2Q2VPK5 515 aaKnown RBP13.75□□□□□ -0.21
NUP50-219ENST00000497960 HBMQ6B0K9 141 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 EIF3MQ7L2H7 374 aaKnown RBP13.75□□□□□ -0.21
NUP50-219ENST00000497960 TRPM8Q7Z2W7 1104 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 BTLAQ7Z6A9 289 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 ARPINQ7Z6K5 226 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 OR8J3Q8NGG0 315 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 OIT3Q8WWZ8 545 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 OSTF1Q92882 214 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 ARSGQ96EG1 525 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 ADGRG7Q96K78 797 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 MRGPRX4Q96LA9 322 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 DACH2Q96NX9 599 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 SH3GL1Q99961 368 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 LAT2Q9GZY6 243 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 CLEC4MQ9H2X3 399 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms