RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 STXBP6Q8NFX7 210 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 OR2L5Q8NG80 312 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 PAQR8Q8TEZ7 354 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 MARC2Q969Z3 335 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 C7orf34Q96L11 122 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 AMDHD1Q96NU7 426 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 SMIM14Q96QK8 99 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 TXN2Q99757 166 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 ALG12Q9BV10 488 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 NXF5Q9H1B4 397 aaKnown RBP3.34□□□□□ -1.87
VPS36-206ENST00000497149 RMND5AQ9H871 391 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 ISG20L2Q9H9L3 353 aaKnown RBP3.34□□□□□ -1.87
VPS36-206ENST00000497149 MARCH5Q9NX47 278 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 SIGLEC8Q9NYZ4 499 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 WARS2Q9UGM6 360 aaKnown RBP3.34□□□□□ -1.87
VPS36-206ENST00000497149 NAP1L2Q9ULW6 460 aaPredicted RBP3.34□□□□□ -1.87
VPS36-206ENST00000497149 ERVW-1Q9UQF0 538 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 FAM231BA6NCW3 169 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 E7ESA3 106 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 RS1O15537 224 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 HCN1O60741 890 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 KIAA0754O94854 1291 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 LRATO95237 230 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 GNA14O95837 355 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 LALBAP00709 142 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 TIMP1P01033 207 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 IGHV3-48P01763 117 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 RPA2P15927 270 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 OTX2P32243 289 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 PPT1P50897 306 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 CHRNB3Q05901 458 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 OTPQ5XKR4 325 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 ATL3Q6DD88 541 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 CCDC137Q6PK04 289 aaKnown RBP3.33□□□□□ -1.88
VPS36-206ENST00000497149 WDR74Q6RFH5 385 aaPredicted RBP3.33□□□□□ -1.88
VPS36-206ENST00000497149 SYT10Q6XYQ8 523 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 NRMQ8IXM6 262 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 SVOPLQ8N434 492 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 GMCL1P1Q8NEA9 526 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 OR9A1PQ8NGU1 263 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 TCTEX1D2Q8WW35 142 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 CTNNBL1Q8WYA6 563 aaPredicted RBP3.33□□□□□ -1.88
VPS36-206ENST00000497149 FRAT1Q92837 279 aaPredicted RBP3.33□□□□□ -1.88
VPS36-206ENST00000497149 SH3YL1Q96HL8 342 aaPredicted RBP3.33□□□□□ -1.88
VPS36-206ENST00000497149 SENP8Q96LD8 212 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 RHBGQ9H310 441 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 SMYD3Q9H7B4 428 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 ADAM22Q9P0K1 906 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 TBK1Q9UHD2 729 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 DCDC2Q9UHG0 476 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 KIF16BQ96L93 1317 aa3.33□□□□□ -1.88
VPS36-206ENST00000497149 KIF2AO00139 706 aaPredicted RBP3.32□□□□□ -1.88
VPS36-206ENST00000497149 ZNF264O43296 627 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 PRKYO43930 277 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 TPST2O60704 377 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 SLITRK3O94933 977 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 IQCF3P0C7M6 154 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 PRKXP51817 358 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 HNRNPA3P51991 378 aaKnown RBP3.32□□□□□ -1.88
VPS36-206ENST00000497149 PLK1P53350 603 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 HSPA2P54652 639 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 HSD17B7P56937 341 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 CBX1P83916 185 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 EOGTQ5NDL2 527 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 KCNIP4Q6PIL6 250 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 MOB3BQ86TA1 216 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 ERI1Q8IV48 349 aaKnown RBP3.32□□□□□ -1.88
VPS36-206ENST00000497149 ZNF100Q8IYN0 542 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 DHRSXQ8N5I4 330 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 SYT14Q8NB59 555 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 PLEKHF1Q96S99 279 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 ERP44Q9BS26 406 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 EDEM2Q9BV94 578 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 ABCB10Q9NRK6 738 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 CD274Q9NZQ7 290 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 RNF14Q9UBS8 474 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 SNX6Q9UNH7 406 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 RASD1Q9Y272 281 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 ARHGAP23Q9P227 1491 aa3.32□□□□□ -1.88
VPS36-206ENST00000497149 MBLAC1A4D2B0 266 aaPredicted RBP3.31□□□□□ -1.88
VPS36-206ENST00000497149 UGT2B4P06133 528 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 POLR2EP19388 210 aaKnown RBP3.31□□□□□ -1.88
VPS36-206ENST00000497149 ELK1P19419 428 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 HNF1AP20823 631 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 P2RY1P47900 373 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 CCDC173Q0VFZ6 552 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 TAF7Q15545 349 aaPredicted RBP3.31□□□□□ -1.88
VPS36-206ENST00000497149 CCDC14Q49A88 953 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 TP53I3Q53FA7 332 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 TTC23Q5W5X9 447 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 UNQ9370/PRO34162Q6UXP9 181 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 ARCQ7LC44 396 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 TMEM252Q8N6L7 170 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 ALLCQ8N6M5 410 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 ANKFN1Q8N957 763 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 OR2AP1Q8NGE2 309 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 OR2T3Q8NH03 318 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 SETD7Q8WTS6 366 aaKnown RBP3.31□□□□□ -1.88
VPS36-206ENST00000497149 PELI1Q96FA3 418 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 TTC25Q96NG3 672 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms