RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 OR2T33Q8NG76 320 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 FANK1Q8TC84 345 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 SLC38A2Q96QD8 506 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 RPS6KB2Q9UBS0 482 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 TMEM5Q9Y2B1 443 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 RPL36Q9Y3U8 105 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 TTC28Q96AY4 2481 aa12.52□□□□□ -0.4
SPTBN1-205ENST00000496323 TEX51A0A1B0GUA7 166 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 A0A1W2PPW3 197 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 FAM86C2PA6NEL3 165 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 M0R082 166 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 SLC2A10O95528 541 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 ADORA3P0DMS8 318 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 SAGP10523 405 aaPredicted RBP12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 NR4A1P22736 598 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 CCKBRP32239 447 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 PNLIPRP2P54317 469 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 CTF1Q16619 201 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 MEDAGQ5VYS4 303 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 FAM198BQ6UWH4 519 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 MARCH3Q86UD3 253 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 ANKRD13BQ86YJ7 626 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 CDK20Q8IZL9 346 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 GALNT15Q8N3T1 639 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 RAB2BQ8WUD1 216 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 DNAJA4Q8WW22 397 aaPredicted RBP12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 TP53INP1Q96A56 240 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 ENPP5Q9UJA9 477 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 TRAV27A0A087WT01 109 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 EFCAB9A8MZ26 197 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 ALG1L2C9J202 215 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 GTPBP1O00178 669 aaKnown RBP12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 BHLHE40O14503 412 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 ADAM10O14672 748 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 TGFBR2P37173 567 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 ST13P50502 369 aaKnown RBP12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 GAS1P54826 345 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 COPZ1P61923 177 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 ZNF117Q03924 483 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 CRYZQ08257 329 aaKnown RBP12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 AQP6Q13520 282 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 FCGR1BQ92637 280 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 LRFN5Q96NI6 719 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 DCUN1D5Q9BTE7 237 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 ULBP3Q9BZM4 244 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 LAT2Q9GZY6 243 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 WDR54Q9H977 334 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 SLC39A1Q9NY26 324 aa12.52□□□□□ -0.41
SPTBN1-205ENST00000496323 ASCC3Q8N3C0 2202 aaKnown RBP12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 IGKV1D-42A0A075B6H8 117 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 A0A1W2PQD3 144 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 KDM4EB2RXH2 506 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 GALR2O43603 387 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 FADS1O60427 444 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 LIPAP38571 399 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 CCR4P51679 360 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 NCF4Q15080 339 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 AADACL4Q5VUY2 407 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 WBP2NLQ6ICG8 309 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 ZNF517Q6ZMY9 492 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 ATG4DQ86TL0 474 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 ANKK1Q8NFD2 765 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 OR51A7Q8NH64 312 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 NUBPLQ8TB37 319 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 THAP3Q8WTV1 239 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 SH3YL1Q96HL8 342 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 TNFRSF13CQ96RJ3 184 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 LPAR4Q99677 370 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 GPN2Q9H9Y4 310 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 ZBTB20Q9HC78 741 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 MCCC2Q9HCC0 563 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 ICAM5Q9UMF0 924 aa12.51□□□□□ -0.41
SPTBN1-205ENST00000496323 TRBV11-1A0A0K0K1C0 115 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 B4E171 279 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 PRODHO43272 600 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 AHCYL1O43865 530 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 CBFA2T3O75081 653 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 RCBTB2O95199 551 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 KLK3P07288 261 aaPredicted RBP12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 CCNA2P20248 432 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 TSPAN7P41732 249 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 CLDN6P56747 220 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 SMARCD3Q6STE5 483 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 TMCO5AQ8N6Q1 288 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 MR1Q95460 341 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 VMP1Q96GC9 406 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 TMEM80Q96HE8 168 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 OR5M11Q96RB7 305 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 PRRG3Q9BZD7 231 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 MED17Q9NVC6 651 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 CLEC2DQ9UHP7 191 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 B3GALT1Q9Y5Z6 326 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 PMS2P1A4D2B8 440 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 OR6C70A6NIJ9 312 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 LRRN3E7EW58 273 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 NOL3O60936 208 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 KLF7O75840 302 aaPredicted RBP12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 GABARAPO95166 117 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 HMGN1P05114 100 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms