RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ELOA3DA6NLF2 546 aaPredicted RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 A8MU76 341 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SLC30A4O14863 429 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SURF4O15260 269 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 AKAP8O43823 692 aaKnown RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 PRKYO43930 277 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 PIP5K1CO60331 668 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 DNAJB6O75190 326 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SEMA7AO75326 666 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 CSO75390 466 aaKnown RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 MED26O95402 600 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 IL33O95760 270 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 PTHP01270 115 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 IGHA1P01876 353 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 CFIP05156 583 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SCG5P05408 212 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 CYC1P08574 325 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 GKN3PP0CG01 181 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 CDK4P11802 303 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 HK1P19367 917 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 NR4A1P22736 598 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 C21orf33P30042 268 aaPredicted RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 TGFBR2P37173 567 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 GRK6P43250 576 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 PPICP45877 212 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 RGS6P49758 472 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 CCR4P51679 360 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 CTBP2P56545 445 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 TAS2R43P59537 309 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 RPS7P62081 194 aaKnown RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 LSM3P62310 102 aaKnown RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 ACTC1P68032 377 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 ACTA1P68133 377 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SPCS2Q15005 226 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 CTF1Q16619 201 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 ELOA3BQ3SY89 546 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 ZNF404Q494X3 552 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 ANKDD1AQ495B1 522 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 CLEC12AQ5QGZ9 265 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 ZNF385CQ66K41 422 aaPredicted RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 WBP2NLQ6ICG8 309 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SLC30A6Q6NXT4 461 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 TUBA3EQ6PEY2 450 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 TMPRSS11FQ6ZWK6 438 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 COMTD1Q86VU5 262 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 NLGN4XQ8N0W4 816 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 NANOGP1Q8N7R0 232 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 BCORP1Q8N888 145 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 LSMEM1Q8N8F7 131 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 MINDY2Q8NBR6 621 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 ELOA3Q8NG57 546 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 C16orf52Q8NHV5 167 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 MCFD2Q8NI22 146 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 ZNF563Q8TA94 476 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SLC2A12Q8TD20 617 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 EDAQ92838 391 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 PMEPA1Q969W9 287 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 OTULINQ96BN8 352 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 CLIP3Q96DZ5 547 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SGTBQ96EQ0 304 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 VMP1Q96GC9 406 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 GAL3ST4Q96RP7 486 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 COQ7Q99807 217 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 RHNO1Q9BSD3 238 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 IFT27Q9BW83 186 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 DPH1Q9BZG8 443 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 OR8D2Q9GZM6 311 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 IRF2BPLQ9H1B7 796 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 DSN1Q9H410 356 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SIAEQ9HAT2 523 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 FGF20Q9NP95 211 aaPredicted RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 EXOSC3Q9NQT5 275 aaKnown RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 PRMT8Q9NR22 394 aaPredicted RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 INPP5EQ9NRR6 644 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 TMEM74BQ9NUR3 256 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 MRPS18AQ9NVS2 196 aaKnown RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 SIDT1Q9NXL6 827 aaKnown RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 DNAJB12Q9NXW2 375 aaKnown RBP6.38□□□□□ -1.39
USP39-219ENST00000496047 STUB1Q9UNE7 303 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 B3GNT3Q9Y2A9 372 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 SLC6A5Q9Y345 797 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 PCDHGB7Q9Y5F8 929 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 PEX16Q9Y5Y5 336 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 NCOR2Q9Y618 2525 aa6.38□□□□□ -1.39
USP39-219ENST00000496047 EML6Q6ZMW3 1958 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 A0A1B0GWA3 101 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 TCRBV16S1A1N1A0A5B0 115 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 CPED1A4D0V7 1026 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 SAGE2PA6NJ88 616 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 KPNA4O00629 521 aaPredicted RBP6.37□□□□□ -1.39
USP39-219ENST00000496047 ZNF264O43296 627 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 KLF4O43474 513 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 HCRTR1O43613 425 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 REM1O75628 298 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 SLC25A12O75746 678 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 NDUFB2O95178 105 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 IGF2P01344 180 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 TP53P04637 393 aaPredicted RBP6.37□□□□□ -1.39
USP39-219ENST00000496047 HEXBP07686 556 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 ZNF12P17014 697 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms