RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 TIGD6Q17RP2 521 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 PRICKLE4Q2TBC4 344 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 FAM111BQ6SJ93 734 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 SPATA19Q7Z5L4 167 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 MOGAT3Q86VF5 341 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 CPOQ8IVL8 374 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 C10orf67Q8IYJ2 551 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 ZNF786Q8N393 782 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 C1orf54Q8WWF1 131 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 C22orf15Q8WYQ4 148 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 OSTF1Q92882 214 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 CPNE4Q96A23 557 aaPredicted RBP8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 C1QTNF5Q9BXJ0 243 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 NARFLQ9H6Q4 476 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 IPPKQ9H8X2 491 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 SAYSD1Q9NPB0 183 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 SLC52A3Q9NQ40 469 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 MAT2BQ9NZL9 334 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 NTMQ9P121 344 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 ABCG2Q9UNQ0 655 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 JRKLQ9Y4A0 524 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 OR10H1Q9Y4A9 318 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 SLC25A15Q9Y619 301 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 A0A0J9YW62 118 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 A0A1W2PR80 420 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 TCRBV7S3A2A0A539 114 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 DNAJC9-AS1A6NH13 148 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 SHOX2O60902 331 aaPredicted RBP8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 PRSS23O95084 383 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 CBX7O95931 251 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 KNG1P01042 644 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 ATP1B1P05026 303 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 ZNF37AP17032 561 aaPredicted RBP8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 EMDP50402 254 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 CORO7P57737 925 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 RAB10P61026 200 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 PHEXP78562 749 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 MRPS35P82673 323 aaKnown RBP8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 RIN1Q13671 783 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 RASA2Q15283 850 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 TBCCQ15814 346 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 ERCC6LQ2NKX8 1250 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 DPY19L1Q2PZI1 675 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 TMEM44Q2T9K0 475 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 FAM45BPQ6NSW5 357 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 BTN2A1Q7KYR7 527 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 FCRLAQ7L513 359 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 GSTA5Q7RTV2 222 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 PEX26Q7Z412 305 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 NUDT13Q86X67 352 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 LAS2Q8IYD9 372 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 SYT14Q8NB59 555 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 OR7G3Q8NG95 312 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 CLDND2Q8NHS1 167 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 FAM45AQ8TCE6 357 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 DUSP19Q8WTR2 217 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 KLHL15Q96M94 604 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 TMEM79Q9BSE2 394 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 C1QTNF6Q9BXI9 259 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 ASPNQ9BXN1 380 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 IFNKQ9P0W0 207 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 KLHL9Q9P2J3 617 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 CTNNAL1Q9UBT7 734 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 KLHL21Q9UJP4 597 aa8.35□□□□□ -1.07
SMARCAL1-213ENST00000496037 TENM3Q9P273 2699 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 A0A087WZY1 265 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 A0A0G2JMP0 313 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 A0A0X1KG70 313 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 LOC100653049A0A140TA62 436 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 CCDC154A6NI56 674 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 MIF4GDA9UHW6 222 aaKnown RBP8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 POLR3GO15318 223 aaPredicted RBP8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 MFAP3LO75121 409 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 STK16O75716 305 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 KRT34O76011 436 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 SCGB1D1O95968 90 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 CT45A8P0DMV1 189 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 CT45A9P0DMV2 189 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 SAGP10523 405 aaPredicted RBP8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 ADRA2CP18825 462 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 SFTPDP35247 375 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 IL1RL1Q01638 556 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 MGAT2Q10469 447 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 SPA17Q15506 151 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 TSNQ15631 228 aaKnown RBP8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 CT45A2Q5DJT8 189 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 FBXO48Q5FWF7 155 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 SEL1L2Q5TEA6 688 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 LEG1Q6P5S2 330 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 RAPH1Q70E73 1250 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 ZNF100Q8IYN0 542 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 UBE2J2Q8N2K1 259 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 SLC43A2Q8N370 569 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 GTPBP8Q8N3Z3 284 aaPredicted RBP8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 RNF175Q8N4F7 328 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 ZNF433Q8N7K0 673 aaPredicted RBP8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 SIGLECL1Q8N7X8 197 aa8.34□□□□□ -1.07
SMARCAL1-213ENST00000496037 CDYL2Q8N8U2 506 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms