RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 PPP2R2BQ00005 443 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 IL1RL1Q01638 556 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 MZT1Q08AG7 82 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 TSTA3Q13630 321 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 MORF4L2Q15014 288 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 NDUFA9Q16795 377 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 PPP1R3AQ16821 1122 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 FAM98BQ52LJ0 330 aaKnown RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 ALG10Q5BKT4 473 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 ALG10BQ5I7T1 473 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 SEL1L2Q5TEA6 688 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 NSUN5P2Q63ZY6 315 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 RAB12Q6IQ22 244 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 TTC27Q6P3X3 843 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 TTC23LQ6PF05 361 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 SBSNQ6UWP8 590 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 CYHR1Q6ZMK1 362 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 MSANTD1Q6ZTZ1 278 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 KIAA1328Q86T90 577 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 ASPGQ86U10 573 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 SLC26A11Q86WA9 606 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 GPSM1Q86YR5 675 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 CCDC71Q8IV32 467 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 SYCE1Q8N0S2 351 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 OTUD6BQ8N6M0 293 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 C10orf53Q8N6V4 93 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 ZFP62Q8NB50 900 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 MFSD9Q8NBP5 474 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 LILRB1Q8NHL6 650 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 C16orf52Q8NHV5 167 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 FAM57AQ8TBR7 257 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 NT5CQ8TCD5 201 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 BCAS4Q8TDM0 211 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 METTL21AQ8WXB1 218 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 TMEM158Q8WZ71 300 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 NXNL1Q96CM4 212 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 SPACA9Q96E40 222 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 HARBI1Q96MB7 349 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 PRAP1Q96NZ9 151 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 SERPINB12Q96P63 405 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 TMEM237Q96Q45 408 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 NDNQ99608 321 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 LPAR4Q99677 370 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 GPR21Q99679 349 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 GFI1Q99684 422 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 EBNA1BP2Q99848 306 aaKnown RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 C1QTNF3Q9BXJ4 246 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 POLDIP3Q9BY77 421 aaKnown RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 AAMDCQ9H7C9 122 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 ZDHHC11Q9H8X9 412 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 KCNK13Q9HB14 408 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 FBXO6Q9NRD1 293 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 DEPPQ9NTK1 212 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 SLC17A6Q9P2U8 582 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 KCNN3Q9UGI6 736 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 IKZF3Q9UKT9 509 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 PDE10AQ9Y233 779 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 RNF6Q9Y252 685 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 KLF13Q9Y2Y9 288 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 RAP2CQ9Y3L5 183 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 L3MBTL1Q9Y468 752 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 FAM215AQ9Y5M1 114 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 SLC22A7Q9Y694 548 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 RAI1Q7Z5J4 1906 aaPredicted RBP3.85□□□□□ -1.79
VPS52-222ENST00000495981 SCN3AQ9NY46 2000 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 DNAJC13O75165 2243 aa3.85□□□□□ -1.79
VPS52-222ENST00000495981 TRBV5-3A0A0A0MS03 114 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 TRBV11-1A0A0K0K1C0 115 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 A0A1B0GTH9 108 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 E5RI56 91 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 PRRG2O14669 202 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 TFECO14948 347 aaPredicted RBP3.84□□□□□ -1.79
VPS52-222ENST00000495981 LCMT2O60294 686 aaKnown RBP3.84□□□□□ -1.79
VPS52-222ENST00000495981 GLSO94925 669 aaPredicted RBP3.84□□□□□ -1.79
VPS52-222ENST00000495981 SYF2O95926 243 aaKnown RBP3.84□□□□□ -1.79
VPS52-222ENST00000495981 TFPIP10646 304 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 ZNF20P17024 532 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 IL10P22301 178 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 HRH2P25021 359 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 CHRNB4P30926 498 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 HNRNPH1P31943 449 aaKnown RBP3.84□□□□□ -1.79
VPS52-222ENST00000495981 HLCSP50747 726 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 HNRNPFP52597 415 aaKnown RBP3.84□□□□□ -1.79
VPS52-222ENST00000495981 PGGT1BP53609 377 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 NAGLUP54802 743 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 CDKN2DP55273 166 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 NUP107P57740 925 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 BTG2P78543 158 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 CDK16Q00536 496 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 OC90Q02509 493 aaPredicted RBP3.84□□□□□ -1.79
VPS52-222ENST00000495981 MYBPHQ13203 477 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 ITGADQ13349 1161 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 FOXE3Q13461 319 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 HERC3Q15034 1050 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 NSDHLQ15738 373 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 HFEQ30201 348 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 C2orf76Q3KRA6 126 aa3.84□□□□□ -1.79
VPS52-222ENST00000495981 TTLL9Q3SXZ7 439 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms