RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 TNFRSF10DQ9UBN6 386 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 TESQ9UGI8 421 aaKnown RBP15.46■□□□□ 0.07
HDAC6-235ENST00000495515 CD300AQ9UGN4 299 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 MAGEL2Q9UJ55 1249 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 CAMK2AQ9UQM7 478 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 SPIN1Q9Y657 262 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-235ENST00000495515 SHANK1Q9Y566 2161 aa15.46■□□□□ 0.07
HDAC6-235ENST00000495515 AHRRA9YTQ3 701 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 SHISA8B8ZZ34 492 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 PYCARD-AS1I3L0S3 204 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 AP3D1O14617 1153 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 WISP1O95388 367 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 NTN1O95631 604 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 FESP07332 822 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 ZNF708P17019 499 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 CD247P20963 164 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 PSMA4P25789 261 aaKnown RBP15.45■□□□□ 0.06
HDAC6-235ENST00000495515 FKBP2P26885 142 aaKnown RBP15.45■□□□□ 0.06
HDAC6-235ENST00000495515 ACAA2P42765 397 aaKnown RBP15.45■□□□□ 0.06
HDAC6-235ENST00000495515 CA7P43166 264 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 STARP49675 285 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 LHX2P50458 406 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 DLX5P56178 289 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 BNIP2Q12982 314 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 SELENBP1Q13228 472 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 C3AR1Q16581 482 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 GLYATQ6IB77 296 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 ZNF585AQ6P3V2 769 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 PLEKHM3Q6ZWE6 761 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 CHMP1BQ7LBR1 199 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 CADM2Q8N3J6 435 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 OR5M9Q8NGP3 310 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 POC1BQ8TC44 478 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 SMPDL3BQ92485 455 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 WDYHV1Q96HA8 205 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 ZNF559Q9BR84 538 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 TRIM2Q9C040 744 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 PNPLA3Q9NST1 481 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 RPS6KB2Q9UBS0 482 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 EGFL7Q9UHF1 273 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 RPS6KA6Q9UK32 745 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 PACSIN3Q9UKS6 424 aa15.45■□□□□ 0.06
HDAC6-235ENST00000495515 PRRC2CQ9Y520 2896 aaKnown RBP15.45■□□□□ 0.06
HDAC6-235ENST00000495515 SVILO95425 2214 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 H0Y3Z8 333 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 EBAG9O00559 213 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 ZNHIT1O43257 154 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 FRS3O43559 492 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 ADAM11O75078 769 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 POLR2HP52434 150 aaKnown RBP15.44■□□□□ 0.06
HDAC6-235ENST00000495515 MAP2K6P52564 334 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 RPS3AP61247 264 aaKnown RBP15.44■□□□□ 0.06
HDAC6-235ENST00000495515 SELENOWP63302 87 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 SRYQ05066 204 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 FXNQ16595 210 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 GLIPR1L2Q4G1C9 344 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 PDSS1Q5T2R2 415 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 C3orf33Q6P1S2 294 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 MTFR2Q6P444 385 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 DOLPP1Q86YN1 238 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 LILRA2Q8N149 483 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 GPR32P1Q8NGA4 272 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 OR52E4Q8NGH9 312 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 SLC25A43Q8WUT9 341 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-235ENST00000495515 ARHGDIGQ99819 225 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 BTBD10Q9BSF8 475 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 MUC13Q9H3R2 512 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 GORASP2Q9H8Y8 452 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 TMEM27Q9HBJ8 222 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 SELENONQ9NZV5 590 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 SH3BGRL2Q9UJC5 107 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 TINAGQ9UJW2 476 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 SNX13Q9Y5W8 968 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 NBASA2RRP1 2371 aa15.44■□□□□ 0.06
HDAC6-235ENST00000495515 FMO6PO60774 539 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 STAMBPO95630 424 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 ZNF682O95780 498 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 EPPINO95925 133 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 PRG2P13727 222 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 NCK1P16333 377 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 ACVR2AP27037 513 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 TACR3P29371 465 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 CRYBA2P53672 197 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 CLDN18P56856 261 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 CEACAM7Q14002 265 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 NRF1Q16656 503 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 C4orf17Q53FE4 359 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 DCST1Q5T197 706 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 C1QL3Q5VWW1 255 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 TMEM211Q6ICI0 200 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 ULK2Q8IYT8 1036 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 UBQLNLQ8IYU4 475 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 LSMEM1Q8N8F7 131 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 FAM156AQ8NDB6 213 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 ZPLD1Q8TCW7 415 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 RELTQ969Z4 430 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 TPD52L3Q96J77 140 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 THTPAQ9BU02 230 aa15.43■□□□□ 0.06
HDAC6-235ENST00000495515 PAQR5Q9NXK6 330 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-235ENST00000495515 SAMD4AQ9UPU9 718 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms