RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 EEF1A1P68104 462 aaKnown RBP14.32□□□□□ -0.12
LIME1-209ENST00000494776 CDK6Q00534 326 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 TFF3Q07654 80 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 FOXF2Q12947 444 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 RUNDC3AQ59EK9 446 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 SLC25A53Q5H9E4 307 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 ZNF311Q5JNZ3 666 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 EEF1A1P5Q5VTE0 462 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 PRAMEF8Q5VWM4 474 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 PRAMEF7Q5VXH5 474 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 ZNF836Q6ZNA1 936 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 RETREG3Q86VR2 466 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 ZNF440Q8IYI8 595 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 CNEP1R1Q8N9A8 125 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 RELL2Q8NC24 303 aaPredicted RBP14.32□□□□□ -0.12
LIME1-209ENST00000494776 NFKBIDQ8NI38 313 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 FNDC9Q8TBE3 224 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 C10orf82Q8WW14 230 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 OSTF1Q92882 214 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 REXO5Q96IC2 774 aaKnown RBP14.32□□□□□ -0.12
LIME1-209ENST00000494776 CGREF1Q99674 301 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 CPPED1Q9BRF8 314 aaPredicted RBP14.32□□□□□ -0.12
LIME1-209ENST00000494776 FAM107BQ9H098 131 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 NSRP1Q9H0G5 558 aaKnown RBP14.32□□□□□ -0.12
LIME1-209ENST00000494776 ACER3Q9NUN7 267 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 DNAJB12Q9NXW2 375 aaKnown RBP14.32□□□□□ -0.12
LIME1-209ENST00000494776 ZNF443Q9Y2A4 671 aaPredicted RBP14.32□□□□□ -0.12
LIME1-209ENST00000494776 GMEB1Q9Y692 573 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 DSPPQ9NZW4 1301 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 LOC100653049A0A140TA62 436 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 CFAP73A6NFT4 308 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 ADAMDEC1O15204 470 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 EFNA2O43921 213 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 DNAJA2O60884 412 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 KRT34O76011 436 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 PGM3O95394 542 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 NTN1O95631 604 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 PLGP00747 810 aaPredicted RBP14.31□□□□□ -0.12
LIME1-209ENST00000494776 THBS1P07996 1170 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 ARAFP10398 606 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 GPX2P18283 190 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 SLC6A2P23975 617 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 ADSLP30566 484 aaPredicted RBP14.31□□□□□ -0.12
LIME1-209ENST00000494776 APOBEC1P41238 236 aaKnown RBP14.31□□□□□ -0.12
LIME1-209ENST00000494776 CYLC2Q14093 348 aaPredicted RBP14.31□□□□□ -0.12
LIME1-209ENST00000494776 CAPRIN1Q14444 709 aaKnown RBP14.31□□□□□ -0.12
LIME1-209ENST00000494776 CYP51A1Q16850 503 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 ZSWIM7Q19AV6 140 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 CTU2Q2VPK5 515 aaKnown RBP14.31□□□□□ -0.12
LIME1-209ENST00000494776 REEP3Q6NUK4 255 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 C3orf33Q6P1S2 294 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 PLEKHM3Q6ZWE6 761 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 KRT73Q86Y46 540 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 ZNF524Q96C55 264 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 ADGRG7Q96K78 797 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 ANKRD27Q96NW4 1050 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 SPOCK3Q9BQ16 436 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 ELAC2Q9BQ52 826 aaKnown RBP14.31□□□□□ -0.12
LIME1-209ENST00000494776 IKZF5Q9H5V7 419 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 BCL2L10Q9HD36 194 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 NPDC1Q9NQX5 325 aaPredicted RBP14.31□□□□□ -0.12
LIME1-209ENST00000494776 RLIMQ9NVW2 624 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 SPIN1Q9Y657 262 aaPredicted RBP14.31□□□□□ -0.12
LIME1-209ENST00000494776 CAPN7Q9Y6W3 813 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 UNC79Q9P2D8 2635 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 KIAA1549Q9HCM3 1950 aa14.31□□□□□ -0.12
LIME1-209ENST00000494776 CDHR4A6H8M9 788 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 BBIP1A8MTZ0 92 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 AP3D1O14617 1153 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 CCDC22O60826 627 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 SMNDC1O75940 238 aaKnown RBP eCLIP14.3□□□□□ -0.12
LIME1-209ENST00000494776 CRHP06850 196 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 PABPC4LP0CB38 370 aaKnown RBP14.3□□□□□ -0.12
LIME1-209ENST00000494776 GKN3PP0CG01 181 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 SHC1P29353 583 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 CPA2P48052 419 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 SEC24CP53992 1094 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 MTPNP58546 118 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 SIRPAP78324 504 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 SCARB2Q14108 478 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 TRMT5Q32P41 509 aaKnown RBP14.3□□□□□ -0.12
LIME1-209ENST00000494776 ZNF550Q7Z398 422 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 GRINAQ7Z429 371 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 SPATA21Q7Z572 469 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 CPLX4Q7Z7G2 160 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 LUZP2Q86TE4 346 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 SNX32Q86XE0 403 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 MCEMP1Q8IX19 187 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 C10orf111Q8N326 155 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 CPNE4Q96A23 557 aaPredicted RBP14.3□□□□□ -0.12
LIME1-209ENST00000494776 OR5B2Q96R09 309 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 SPATA5L1Q9BVQ7 753 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 SPATA9Q9BWV2 254 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 TRIM8Q9BZR9 551 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 ENKD1Q9H0I2 346 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 PIGMQ9H3S5 423 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 TMEM38AQ9H6F2 299 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 RNF122Q9H9V4 155 aa14.3□□□□□ -0.12
LIME1-209ENST00000494776 A0A1W2PNV4 684 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 ETV2O00321 342 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms