RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 PGCP20142 388 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 ENPP1P22413 925 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 KHKP50053 298 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 RAC3P60763 192 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 ZNF239Q16600 458 aaKnown RBP13.92□□□□□ -0.18
LIMS2-216ENST00000494613 GSTA3Q16772 222 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 PDCD4Q53EL6 469 aaKnown RBP13.92□□□□□ -0.18
LIMS2-216ENST00000494613 COX20Q5RI15 118 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 STAC2Q6ZMT1 411 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 BEND4Q6ZU67 534 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 NUFIP2Q7Z417 695 aaKnown RBP13.92□□□□□ -0.18
LIMS2-216ENST00000494613 HMGN2P46Q86SG4 172 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 TUSC5Q8IXB3 177 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 ANKFN1Q8N957 763 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 ABHD3Q8WU67 409 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 OIT3Q8WWZ8 545 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 TMEM234Q8WY98 164 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 ST8SIA1Q92185 356 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 ZC3HAV1LQ96H79 300 aaKnown RBP13.92□□□□□ -0.18
LIMS2-216ENST00000494613 TRNT1Q96Q11 434 aaKnown RBP13.92□□□□□ -0.18
LIMS2-216ENST00000494613 C12orf49Q9H741 205 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 SERINC1Q9NRX5 453 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 SLC6A13Q9NSD5 602 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 ACER3Q9NUN7 267 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 LIPT1Q9Y234 373 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 SLC35A3Q9Y2D2 325 aa13.92□□□□□ -0.18
LIMS2-216ENST00000494613 HEATR5AQ86XA9 2040 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 CLDN24A6NM45 220 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 DEFB108AA8MXU0 73 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 RFXANKO14593 260 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 ATE1O95260 518 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 RAF1P04049 648 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 YES1P07947 543 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 CRYGSP22914 178 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 AGTR1P30556 359 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 CCKARP32238 428 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 RYKP34925 604 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 MERTKQ12866 999 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 SELENBP1Q13228 472 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 KEAP1Q14145 624 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 RNPS1Q15287 305 aaKnown RBP13.91□□□□□ -0.18
LIMS2-216ENST00000494613 TMEM201Q5SNT2 666 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 EPGNQ6UW88 154 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 LRRC74BQ6ZQY2 392 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 FCRLAQ7L513 359 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 SLC43A2Q8N370 569 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 FAM71CQ8NEG0 241 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 PNPT1Q8TCS8 783 aaKnown RBP13.91□□□□□ -0.18
LIMS2-216ENST00000494613 RNF128Q8TEB7 428 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 ZFP90Q8TF47 636 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 MBD6Q96DN6 1003 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 OR5B2Q96R09 309 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 SLC38A1Q9H2H9 487 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 COQ10BQ9H8M1 238 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 SDR39U1Q9NRG7 319 aaPredicted RBP13.91□□□□□ -0.18
LIMS2-216ENST00000494613 ZIM2Q9NZV7 527 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 USH1CQ9Y6N9 552 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 F8P00451 2351 aa13.91□□□□□ -0.18
LIMS2-216ENST00000494613 IGHV3-15A0A0B4J1V0 119 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 DIAPH2O60879 1101 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 KRT75O95678 551 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 THBDP07204 575 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 CHRM4P08173 479 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 SLC7A1P30825 629 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 APOBEC1P41238 236 aaKnown RBP13.9□□□□□ -0.18
LIMS2-216ENST00000494613 ANXA11P50995 505 aaKnown RBP13.9□□□□□ -0.18
LIMS2-216ENST00000494613 POLR2JP52435 117 aaKnown RBP13.9□□□□□ -0.18
LIMS2-216ENST00000494613 TXNL4AP83876 142 aaKnown RBP13.9□□□□□ -0.18
LIMS2-216ENST00000494613 PAMR1Q6UXH9 720 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 PLEKHM3Q6ZWE6 761 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 STK32CQ86UX6 486 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 ADGRG3Q86Y34 549 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 ARFGAP2Q8N6H7 521 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 ZNF563Q8TA94 476 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 CNOT9Q92600 299 aaKnown RBP13.9□□□□□ -0.18
LIMS2-216ENST00000494613 ZNF775Q96BV0 537 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-216ENST00000494613 PIK3IP1Q96FE7 263 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 GP6Q9HCN6 339 aa13.9□□□□□ -0.18
LIMS2-216ENST00000494613 AGAP5A6NIR3 686 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 KLF4O43474 513 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 ADAM11O75078 769 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 ZCCHC18P0CG32 403 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 NR2F1P10589 423 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 CD53P19397 219 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 IDH2P48735 452 aaKnown RBP13.89□□□□□ -0.19
LIMS2-216ENST00000494613 MVDP53602 400 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 PLAURQ03405 335 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 MAPK11Q15759 364 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 DEFB113Q30KQ7 82 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 TMPPEQ6ZT21 453 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 PMM1Q92871 262 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 VPS33AQ96AX1 596 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 ITCHQ96J02 903 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 ATP6V1G3Q96LB4 118 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 CCDC106Q9BWC9 280 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 HDHD5Q9BXW7 423 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 SLCO1B3Q9NPD5 702 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 FANCFQ9NPI8 374 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 CTPS2Q9NRF8 586 aa13.89□□□□□ -0.19
LIMS2-216ENST00000494613 ING1Q9UK53 422 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms