RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 HBQ1P09105 142 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 H2AFZP0C0S5 128 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 HSPA5P11021 654 aaKnown RBP3.27□□□□□ -1.89
SMC4-224ENST00000494612 PAX7P23759 505 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 ZBTB25P24278 435 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 PRKAR2BP31323 418 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 VLDLRP98155 873 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 BCL2L1Q07817 233 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 ELP6Q0PNE2 266 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 PJVKQ0ZLH3 352 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 CUL1Q13616 776 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 DPYSL3Q14195 570 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 ZNF658Q5TYW1 1059 aaPredicted RBP3.27□□□□□ -1.89
SMC4-224ENST00000494612 ACSM5Q6NUN0 579 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 BAIAP2L2Q6UXY1 529 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 HSCBQ8IWL3 235 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 C11orf53Q8IXP5 236 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 FADS6Q8N9I5 356 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 OR5AU1Q8NGC0 362 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 OR10T2Q8NGX3 314 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 PNPT1Q8TCS8 783 aaKnown RBP3.27□□□□□ -1.89
SMC4-224ENST00000494612 DTNBP1Q96EV8 351 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 TMEM80Q96HE8 168 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 ZNF414Q96IQ9 312 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 MAPKAP1Q9BPZ7 522 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 MEAF6Q9HAF1 191 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 TNFRSF19Q9NS68 423 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 SMC3Q9UQE7 1217 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 TULP4Q9NRJ4 1543 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 ATP7BP35670 1465 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 CRB1P82279 1406 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 ATP10DQ9P241 1426 aa3.27□□□□□ -1.89
SMC4-224ENST00000494612 MAP3K5Q99683 1374 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 GOLGB1Q14789 3259 aaKnown RBP3.26□□□□□ -1.89
SMC4-224ENST00000494612 ESYT2A0FGR8 921 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 TRIM3O75382 744 aaPredicted RBP3.26□□□□□ -1.89
SMC4-224ENST00000494612 UFL1O94874 794 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 IGF1P05019 195 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 VDAC1P21796 283 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 DRD5P21918 477 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 MEOX2P50222 304 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 HSD17B7P56937 341 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 IGLV3-21P80748 117 aaPredicted RBP3.26□□□□□ -1.89
SMC4-224ENST00000494612 EWSR1Q01844 656 aaKnown RBP eCLIP3.26□□□□□ -1.89
SMC4-224ENST00000494612 SNTB2Q13425 540 aaKnown RBP3.26□□□□□ -1.89
SMC4-224ENST00000494612 ATXN7L3Q14CW9 347 aaPredicted RBP3.26□□□□□ -1.89
SMC4-224ENST00000494612 WSCD1Q658N2 575 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 KCNIP4Q6PIL6 250 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 TMEM17Q86X19 198 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 CADM2Q8N3J6 435 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 ZNF525Q8N782 197 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 DENND6BQ8NEG7 585 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 NANPQ8TBE9 248 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 THRSPQ92748 146 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 RPL3LQ92901 407 aaKnown RBP3.26□□□□□ -1.89
SMC4-224ENST00000494612 SYAP1Q96A49 352 aaPredicted RBP3.26□□□□□ -1.89
SMC4-224ENST00000494612 TTC25Q96NG3 672 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 CAB39LQ9H9S4 337 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 MRPL39Q9NYK5 338 aaKnown RBP3.26□□□□□ -1.89
SMC4-224ENST00000494612 EHFQ9NZC4 300 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 MOKQ9UQ07 419 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 RNF6Q9Y252 685 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 ABCA7Q8IZY2 2146 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 LMO7Q8WWI1 1683 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 WNK3Q9BYP7 1800 aa3.26□□□□□ -1.89
SMC4-224ENST00000494612 CPDO75976 1380 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 SF3B1O75533 1304 aaKnown RBP eCLIP3.25□□□□□ -1.89
SMC4-224ENST00000494612 IGLV8-61A0A075B6I0 122 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 FAM220BPB1ANY3 271 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 CDX4O14627 284 aaPredicted RBP3.25□□□□□ -1.89
SMC4-224ENST00000494612 TNFSF11O14788 317 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 HAT1O14929 419 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 NOL3O60936 208 aaKnown RBP3.25□□□□□ -1.89
SMC4-224ENST00000494612 GPX5O75715 221 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 KRT6BP04259 564 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 CD55P08174 381 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 CLUP10909 449 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 ADORA2BP29275 332 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 ADSSP30520 456 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 KRT6CP48668 564 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 KRTAP10-1P60331 282 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 RPL32P62910 135 aaKnown RBP3.25□□□□□ -1.89
SMC4-224ENST00000494612 NDPQ00604 133 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 PAGE2BQ5JRK9 111 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 RIPPLY2Q5TAB7 128 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 GALNT17Q6IS24 598 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 SLC25A24Q6NUK1 477 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 ANKRD37Q7Z713 158 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 C11orf42Q8N5U0 333 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 MS4A14Q96JA4 679 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 VPS39Q96JC1 886 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 DPH7Q9BTV6 452 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 PAXXQ9BUH6 204 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 CRNKL1Q9BZJ0 848 aaKnown RBP3.25□□□□□ -1.89
SMC4-224ENST00000494612 TMEM117Q9H0C3 514 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 SLITRK2Q9H156 845 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 PLSCR3Q9NRY6 295 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms