RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 GPR68Q15743 365 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 UGT3A2Q3SY77 523 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 TIGD2Q4W5G0 525 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 ARL13AQ5H913 290 aaPredicted RBP11.19□□□□□ -0.62
SKA1-205ENST00000494518 HMBOX1Q6NT76 420 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 RNF165Q6ZSG1 346 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 OR5P2Q8WZ92 322 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 MRGPRX4Q96LA9 322 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 HS6ST2Q96MM7 605 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 TRMOQ9BU70 441 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 THUMPD3Q9BV44 507 aaKnown RBP11.19□□□□□ -0.62
SKA1-205ENST00000494518 TRIM2Q9C040 744 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 HOXD1Q9GZZ0 328 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 SERHL2Q9H4I8 314 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 ALG2Q9H553 416 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 NPAP1Q9NZP6 1156 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 KLHL9Q9P2J3 617 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 SLC17A7Q9P2U7 560 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 MID2Q9UJV3 735 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 DTNAQ9Y4J8 743 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 NPIPB9F8W1W9 429 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 ABCD4O14678 606 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 ZNF264O43296 627 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 SPAG7O75391 227 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 CD8AP01732 235 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 FESP07332 822 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 DDX5P17844 614 aaKnown RBP11.18□□□□□ -0.62
SKA1-205ENST00000494518 IGHV1-2P23083 117 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 MAPK1P28482 360 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 ARRB2P32121 409 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 OR3A2P47893 321 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 RAC3P60763 192 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 SPOCK1Q08629 439 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 P2RY6Q15077 328 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 ATP6AP1LQ52LC2 224 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 IL23RQ5VWK5 629 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 HEPHL1Q6MZM0 1159 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 Q6ZT83 130 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 HMGN2P46Q86SG4 172 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 TDRPQ86YL5 185 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 SLC43A2Q8N370 569 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 FNDC5Q8NAU1 212 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 TOR1AIP2Q8NFQ8 470 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 OR5W2Q8NH69 310 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 KIF18AQ8NI77 898 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 HTRA1Q92743 480 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 APOPT1Q96IL0 206 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 PPP3R2Q96LZ3 170 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 TRAF4Q9BUZ4 470 aaPredicted RBP11.18□□□□□ -0.62
SKA1-205ENST00000494518 CISD1Q9NZ45 108 aaKnown RBP11.18□□□□□ -0.62
SKA1-205ENST00000494518 KCNE5Q9UJ90 142 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 ACTL7BQ9Y614 415 aa11.18□□□□□ -0.62
SKA1-205ENST00000494518 SVEP1Q4LDE5 3571 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 ARFGEF3Q5TH69 2177 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 A0A1W2PR80 420 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 SERINC4A6NH21 518 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 RNF212BA8MTL3 300 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 ESPNB1AK53 854 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 SHISA9B4DS77 424 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 SSX4O60224 188 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 GPRIN2O60269 458 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 NPHS1O60500 1241 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 CYTIPO60759 359 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 RAD51DO75771 328 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 KRT16P08779 473 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 UBTFL6P0CB48 400 aaPredicted RBP11.17□□□□□ -0.62
SKA1-205ENST00000494518 RPL3P39023 403 aaKnown RBP11.17□□□□□ -0.62
SKA1-205ENST00000494518 SESN3P58005 492 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 HBA1P69905 142 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 CHRNEQ04844 493 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 MERTKQ12866 999 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 CBFBQ13951 182 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 ETFDHQ16134 617 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 PGS1Q32NB8 556 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 LSM12Q3MHD2 195 aaKnown RBP11.17□□□□□ -0.62
SKA1-205ENST00000494518 XKR7Q5GH72 579 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 C6orf136Q5SQH8 315 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 C3orf33Q6P1S2 294 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 ZNF100Q8IYN0 542 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 CLECL1Q8IZS7 167 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 SPATA3Q8NHX4 192 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 SFXN5Q8TD22 340 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 ZNF75CPQ92670 426 aaPredicted RBP11.17□□□□□ -0.62
SKA1-205ENST00000494518 SDF2Q99470 211 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 BCO1Q9HAY6 547 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 GP6Q9HCN6 339 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 MKLN1Q9UL63 735 aa11.17□□□□□ -0.62
SKA1-205ENST00000494518 IGHV4-30-2A0A087WSY4 118 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 RNF103-CHMP3A0A140T963 221 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 CD5LO43866 347 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 EIF4E2O60573 245 aaKnown RBP11.16□□□□□ -0.62
SKA1-205ENST00000494518 FCMRO60667 390 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 BCAS1O75363 584 aaPredicted RBP11.16□□□□□ -0.62
SKA1-205ENST00000494518 FGF4P08620 206 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 TFPIP10646 304 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 GGT1P19440 569 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 MATN1P21941 496 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 DIO1P49895 249 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 ZNF83P51522 516 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 SKP2Q13309 424 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms