RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 FOXK1P85037 733 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 FOXF1Q12946 379 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 ATMQ13315 3056 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 LAPTM4AQ15012 233 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 ATP6AP1Q15904 470 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 COLEC12Q5KU26 742 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 GDF7Q7Z4P5 450 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 RIMS3Q9UJD0 308 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 SAMHD1Q9Y3Z3 626 aaKnown RBP17.6■□□□□ 0.41
USP39-218ENST00000493829 PCNX3Q9H6A9 2034 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 TRAPPC13A5PLN9 417 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 DEAF1O75398 565 aaPredicted RBP17.59■□□□□ 0.41
USP39-218ENST00000493829 ATP6V1G2O95670 118 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 H1F0P07305 194 aaKnown RBP17.59■□□□□ 0.41
USP39-218ENST00000493829 HOXB6P17509 224 aaKnown RBP17.59■□□□□ 0.41
USP39-218ENST00000493829 CCNA2P20248 432 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 DPP4P27487 766 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 PLPPR5Q32ZL2 321 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 ALG10BQ5I7T1 473 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 FBXW10Q5XX13 1052 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 WBP2NLQ6ICG8 309 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 ZNF605Q86T29 641 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 OFCC1Q8IZS5 231 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 PQLC1Q8N2U9 271 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 ICA1LQ8NDH6 482 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 REEP1Q9H902 201 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 NMNAT1Q9HAN9 279 aaPredicted RBP17.59■□□□□ 0.41
USP39-218ENST00000493829 DNAJB9Q9UBS3 223 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 ACACBO00763 2458 aa17.59■□□□□ 0.41
USP39-218ENST00000493829 A0A0B4J2E0 115 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 A0A1B0GX12 115 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 DPM1O60762 260 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 E2F6O75461 281 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 TRAPPC6AO75865 159 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 OR5F1O95221 314 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 GADD45GO95257 159 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 PRKCAP17252 672 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 HK1P19367 917 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 TACR3P29371 465 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 MERTKQ12866 999 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 ST3GAL2Q16842 350 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 NADK2Q4G0N4 442 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 C3orf49Q96BT1 292 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 ZNF703Q9H7S9 590 aaPredicted RBP17.58■□□□□ 0.41
USP39-218ENST00000493829 DCLRE1BQ9H816 532 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 HHATLQ9HCP6 504 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 MAN2C1Q9NTJ4 1040 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 SELENONQ9NZV5 590 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 B4GALT7Q9UBV7 327 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 ACAD8Q9UKU7 415 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 PCDHGB7Q9Y5F8 929 aa17.58■□□□□ 0.41
USP39-218ENST00000493829 MAP1BP46821 2468 aaKnown RBP17.58■□□□□ 0.4
USP39-218ENST00000493829 TRBV4-1A0A0J9YWV2 114 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 SAC3D1A6NKF1 404 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 ADAMDEC1O15204 470 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 CBR3O75828 277 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 CELA3AP09093 270 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 IFNA8P32881 189 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 SLC1A3P43003 542 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 MAGEA5P43359 124 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 EXOC3L2Q2M3D2 409 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 RAET1LQ5VY80 246 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 ZNF613Q6PF04 617 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 WDR88Q6ZMY6 472 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 Q6ZS92 163 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 YRDCQ86U90 279 aaKnown RBP17.58■□□□□ 0.4
USP39-218ENST00000493829 NKAIN4Q8IVV8 208 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 LSMEM1Q8N8F7 131 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 RNPEPL1Q9HAU8 725 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 NTN4Q9HB63 628 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 B3GNT3Q9Y2A9 372 aa17.58■□□□□ 0.4
USP39-218ENST00000493829 CACNA1GO43497 2377 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 ITPR1Q14643 2758 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 TNFRSF11BO00300 401 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 FAAHO00519 579 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 DSCR4P56555 118 aaPredicted RBP17.57■□□□□ 0.4
USP39-218ENST00000493829 PPIAP62937 165 aaKnown RBP17.57■□□□□ 0.4
USP39-218ENST00000493829 ST3GAL3Q11203 375 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 SLC6A19Q695T7 634 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 TMEM179BQ7Z7N9 219 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 P3H2Q8IVL5 708 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 TMEM251Q8N6I4 163 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 FAM98AQ8NCA5 519 aaKnown RBP17.57■□□□□ 0.4
USP39-218ENST00000493829 PIK3C3Q8NEB9 887 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 OR14L1PQ8NHC6 308 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 TMEM255BQ8WV15 326 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 TMEM234Q8WY98 164 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 TSPAN10Q9H1Z9 355 aaPredicted RBP17.57■□□□□ 0.4
USP39-218ENST00000493829 ACER3Q9NUN7 267 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 LHX6Q9UPM6 363 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 LYVE1Q9Y5Y7 322 aa17.57■□□□□ 0.4
USP39-218ENST00000493829 BOD1L1Q8NFC6 3051 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 KPNA4O00629 521 aaPredicted RBP17.56■□□□□ 0.4
USP39-218ENST00000493829 LYPD3O95274 346 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 FOXK2Q01167 660 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 TRAM2Q15035 370 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 RNFT1Q5M7Z0 435 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 ULK3Q6PHR2 472 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 HS3ST5Q8IZT8 346 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 EXD3Q8N9H8 876 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms