RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PRRT4C9JH25 899 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 PPIHO43447 177 aaKnown RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 SMAD6O43541 496 aaKnown RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 B4GALT3O60512 393 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 KERAO60938 352 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 SOCS5O75159 536 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 CA11O75493 328 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 AHSA1O95433 338 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 CRYABP02511 175 aaKnown RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 HOXB5P09067 269 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 GAAP10253 952 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 HOXA5P20719 270 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 TTPAP49638 278 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 FAM189BP81408 668 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 DCDP81605 110 aaKnown RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 MRPS11P82912 194 aaKnown RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 DGCR2P98153 550 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 EIF4EBP2Q13542 120 aaPredicted RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 INPP5JQ15735 1006 aaPredicted RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 SPANXN4Q5MJ08 99 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 C6orf136Q5SQH8 315 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 FAM180AQ6UWF9 173 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 UNQ6126/PRO20091Q6UXV3 157 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 SLC36A4Q6YBV0 504 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 TPGS1Q6ZTW0 290 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 TRIM46Q7Z4K8 759 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 IQCHQ86VS3 1027 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 CACUL1Q86Y37 369 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 OR5T1Q8NG75 326 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 TSSK6Q9BXA6 273 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 SNHG12Q9BXW3 62 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 SRMSQ9H3Y6 488 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 EIF2B3Q9NR50 452 aaKnown RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 CTPS2Q9NRF8 586 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 PLXNB3Q9ULL4 1909 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 CCL15-CCL14A0A0B4J2E2 113 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 TEX13DA0A0J9YY54 714 aaPredicted RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 MBLAC1A4D2B0 266 aaPredicted RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 SEC14L6B5MCN3 397 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 LRRN3E7EW58 273 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 J3QW42 95 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 CHST10O43529 356 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 MPZL2O60487 215 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 MAFKO60675 156 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 MMP2P08253 660 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 MGMTP16455 207 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 CELP19835 753 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 PSMB1P20618 241 aaKnown RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 PRPS1L1P21108 318 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 CSNK1DP48730 415 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF140P52738 457 aaPredicted RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 RABGGTBP53611 331 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 PTTG1IPP53801 180 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 SRSF3P84103 164 aaKnown RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 SEMG2Q02383 582 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 LAMTOR4Q0VGL1 99 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 LCP2Q13094 533 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 CCL15Q16663 113 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 DCXRQ7Z4W1 244 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 CBARPQ8N350 705 aaPredicted RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 NUDT10Q8NFP7 164 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 SEMA6DQ8NFY4 1073 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 OR9Q2Q8NGE9 314 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 PPTC7Q8NI37 304 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 DUSP19Q8WTR2 217 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 DTD2Q96FN9 168 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 NOL4LQ96MY1 436 aaPredicted RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 OR1F2PQ96R84 312 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 FCRL5Q96RD9 977 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 FAM83CQ9BQN1 747 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 MAGEB5Q9BZ81 275 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 TRIM2Q9C040 744 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 SLITRK2Q9H156 845 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 LRRN3Q9H3W5 708 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 RNF122Q9H9V4 155 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 DOK5Q9P104 306 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 RCE1Q9Y256 329 aa6.4□□□□□ -1.39
VPS13B-205ENST00000493587 AAR2Q9Y312 384 aaKnown RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 RPL36Q9Y3U8 105 aaKnown RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 TMEM184BQ9Y519 407 aaPredicted RBP6.4□□□□□ -1.39
VPS13B-205ENST00000493587 C20orf202A1L168 122 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 TLR4O00206 839 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 SEPT4O43236 478 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 PRICKLE3O43900 615 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-205ENST00000493587 MFSD11O43934 449 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 FKTNO75072 461 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 GPR32O75388 356 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 SC5DO75845 299 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 SOX14O95416 240 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 ACTL6AO96019 429 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 PRPS2P11908 318 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 GOT1P17174 413 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 BTCP35070 178 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 NDUFV1P49821 464 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 ART1P52961 327 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 EPHB3P54753 998 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 REEP5Q00765 189 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 TAP2Q03519 686 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 PPIGQ13427 754 aaKnown RBP eCLIP6.39□□□□□ -1.394e-6■■□□□ 13.5
VPS13B-205ENST00000493587 ZNF699Q32M78 642 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms