RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	GALNT5	Q7Z7M9	940 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	TMCO5A	Q8N6Q1	288 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZNF527	Q8NB42	609 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	OR7A2P	Q8NGA2	310 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	OR5W2	Q8NH69	310 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	FAM168A	Q92567	244 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	CCDC126	Q96EE4	140 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	DNAJA3	Q96EY1	480 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	METTL2A	Q96IZ6	378 aa	Known RBP	12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	IQCG	Q9H095	443 aa	Known RBP	12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	SHARPIN	Q9H0F6	387 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	GPATCH2	Q9NW75	528 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	GIMAP2	Q9UG22	337 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	DCDC2	Q9UHG0	476 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	POU2F3	Q9UKI9	436 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	DTNA	Q9Y4J8	743 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	SLC25A15	Q9Y619	301 aa		12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
SAMM50-204	ENST00000493161	CENPVL1	A0A0U1RR11	272 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	ETV2	O00321	342 aa	Predicted RBP	12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	LSM1	O15116	133 aa	Known RBP	12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	RIPK2	O43353	540 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	PLIN3	O60664	434 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	URI1	O94763	535 aa	Predicted RBP	12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	HSPA4L	O95757	839 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	LAMP1	P11279	417 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	BCKDHA	P12694	445 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	SLC25A16	P16260	332 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	CCR4	P51679	360 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	DNAJB13	P59910	316 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	TP53BP2	Q13625	1128 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	GALNTL6	Q49A17	601 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	CFAP157	Q5JU67	520 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	LIPM	Q5VYY2	423 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	TMEM108	Q6UXF1	575 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	P2RY8	Q86VZ1	359 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	FBXL14	Q8N1E6	418 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	UBE2J2	Q8N2K1	259 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	THUMPD3	Q9BV44	507 aa	Known RBP	12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	ACTRT3	Q9BYD9	372 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	HOXD1	Q9GZZ0	328 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	OXSM	Q9NWU1	459 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	KCNE5	Q9UJ90	142 aa		12.04	□□□□□ -0.48
SAMM50-204	ENST00000493161	CCT8L1P	A6NM43	557 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZNF716	A6NP11	495 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	TMEM233	B4DJY2	109 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161		H3BNH8	94 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161		H3BQF6	201 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161		H7C417	338 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161		M0R1B8	84 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	AZIN1	O14977	448 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	ZNF264	O43296	627 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	LMX1B	O60663	402 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	USF1	P22415	310 aa	Predicted RBP	12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	CCT3	P49368	545 aa	Known RBP	12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	DIO1	P49895	249 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	SKP2	Q13309	424 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	MLC1	Q15049	377 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	PDZK1	Q5T2W1	519 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	FBXW9	Q5XUX1	488 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	ABLIM2	Q6H8Q1	611 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	OR5D16	Q8NGK9	328 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	ADAMTS15	Q8TE58	950 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	RADIL	Q96JH8	1075 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	CHODL	Q9H9P2	273 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	LPAR3	Q9UBY5	353 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	ATP6V1H	Q9UI12	483 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	MGAT4B	Q9UQ53	548 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	DNAJC15	Q9Y5T4	150 aa		12.03	□□□□□ -0.48
SAMM50-204	ENST00000493161	CIB4	A0PJX0	185 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	HAX1	O00165	279 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	SCAMP2	O15127	329 aa	Known RBP	12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	EIF4E2	O60573	245 aa	Known RBP	12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	DNAJA2	O60884	412 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	GLRA3	O75311	464 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	BCAS1	O75363	584 aa	Predicted RBP	12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	CYP7B1	O75881	506 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	C6orf47	O95873	294 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	FAM153B	P0C7A2	387 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	DHRS4L1	P0CG22	281 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	UBL4A	P11441	157 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	CPA3	P15088	417 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	PTAFR	P25105	342 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	SESN3	P58005	492 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	RPS26	P62854	115 aa	Known RBP	12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	LSM11	P83369	360 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	SLC25A3	Q00325	362 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	WHAMMP3	Q1A5X7	153 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	FAM153C	Q494X1	144 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	C9orf135	Q5VTT2	229 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	KANK2	Q63ZY3	851 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	C3orf33	Q6P1S2	294 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	TMPPE	Q6ZT21	453 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	WDR31	Q8NA23	367 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	TOR1AIP2	Q8NFQ8	470 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	OR52E4	Q8NGH9	312 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	OR5AK3P	Q8NH89	298 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	PSMA8	Q8TAA3	256 aa		12.02	□□□□□ -0.49
SAMM50-204	ENST00000493161	MTERF3	Q96E29	417 aa		12.02	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms