RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 STX3Q13277 289 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 PDK3Q15120 406 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 TOMM34Q15785 309 aaPredicted RBP11.08□□□□□ -0.64
COL6A1-205ENST00000492851 ETFDHQ16134 617 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 PDCD2Q16342 344 aaPredicted RBP11.08□□□□□ -0.64
COL6A1-205ENST00000492851 OR4F3Q6IEY1 312 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 TMPPEQ6ZT21 453 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 Q6ZT83 130 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 P2RY8Q86VZ1 359 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF781Q8N8C0 355 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 XAGE5Q8WWM1 108 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 PMM1Q92871 262 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 S100PBPQ96BU1 408 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 ZHX1-C8orf76Q96EF9 292 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 TRMT61AQ96FX7 289 aaKnown RBP11.08□□□□□ -0.64
COL6A1-205ENST00000492851 COX4I2Q96KJ9 171 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 Q96MF0 132 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF350Q9GZX5 532 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 ACER3Q9NUN7 267 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 EMC3Q9P0I2 261 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 MKLN1Q9UL63 735 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 LIPT1Q9Y234 373 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 WDR45Q9Y484 360 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 RNF115Q9Y4L5 304 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 ESPNB1AK53 854 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 OIP5O43482 229 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 DNPH1O43598 174 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 ITM2AO43736 263 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 S100A3P33764 101 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 CHI3L1P36222 383 aaPredicted RBP11.07□□□□□ -0.64
COL6A1-205ENST00000492851 HTR3AP46098 478 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 OR3A2P47893 321 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 SESN3P58005 492 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 RPS26P62854 115 aaKnown RBP11.07□□□□□ -0.64
COL6A1-205ENST00000492851 HPCAP84074 193 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 MERTKQ12866 999 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 SKP2Q13309 424 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 GNA13Q14344 377 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 DNAJC14Q6Y2X3 702 aaPredicted RBP11.07□□□□□ -0.64
COL6A1-205ENST00000492851 NUFIP2Q7Z417 695 aaKnown RBP11.07□□□□□ -0.64
COL6A1-205ENST00000492851 GALNT5Q7Z7M9 940 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 MTDHQ86UE4 582 aaKnown RBP11.07□□□□□ -0.64
COL6A1-205ENST00000492851 CLECL1Q8IZS7 167 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF563Q8TA94 476 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 NUDT8Q8WV74 236 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 IGFBPL1Q8WX77 278 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 AKAP1Q92667 903 aaKnown RBP eCLIP11.07□□□□□ -0.64
COL6A1-205ENST00000492851 GTPBP3Q969Y2 492 aaKnown RBP11.07□□□□□ -0.64
COL6A1-205ENST00000492851 ROPN1LQ96C74 230 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 MUCL1Q96DR8 90 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 NEURL3Q96EH8 262 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 RADILQ96JH8 1075 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 OR5B2Q96R09 309 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 KLHDC3Q9BQ90 382 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 PSD2Q9BQI7 771 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 POTEKPQ9BYX7 375 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 SAP130Q9H0E3 1048 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 OR51I1Q9H343 314 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 COQ10BQ9H8M1 238 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 EXOSC3Q9NQT5 275 aaKnown RBP11.07□□□□□ -0.64
COL6A1-205ENST00000492851 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.07□□□□□ -0.64
COL6A1-205ENST00000492851 BTNL2Q9UIR0 455 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 HAO1Q9UJM8 370 aa11.07□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF469Q96JG9 3925 aaPredicted RBP11.07□□□□□ -0.64
COL6A1-205ENST00000492851 AKAP6Q13023 2319 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 A0A1W2PNR3 127 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 H7C1Q1 480 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 SULT2B1O00204 365 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 GPR171O14626 319 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 KIAA0513O60268 411 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 SCN2BO60939 215 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 CPSF4O95639 269 aaKnown RBP11.06□□□□□ -0.64
COL6A1-205ENST00000492851 UBTFL6P0CB48 400 aaPredicted RBP11.06□□□□□ -0.64
COL6A1-205ENST00000492851 DHRS4L1P0CG22 281 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 OR12D1P0DN82 309 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 PGM1P36871 562 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 MAGEA8P43361 318 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 DIO1P49895 249 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 KHKP50053 298 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 RPS4XP62701 263 aaKnown RBP11.06□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF844Q08AG5 666 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 CAPRIN1Q14444 709 aaKnown RBP11.06□□□□□ -0.64
COL6A1-205ENST00000492851 CASP8Q14790 479 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 TAB1Q15750 504 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 NDUFAF6Q330K2 333 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 SYT14P1Q58G82 188 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 NCMAPQ5T1S8 102 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 TYW3Q6IPR3 259 aaKnown RBP11.06□□□□□ -0.64
COL6A1-205ENST00000492851 OGFOD2Q6N063 350 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 BHLHA15Q7RTS1 189 aaPredicted RBP11.06□□□□□ -0.64
COL6A1-205ENST00000492851 GRINAQ7Z429 371 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 SPATA19Q7Z5L4 167 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 CMIPQ8IY22 773 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF100Q8IYN0 542 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF619Q8N2I2 560 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 PIWIL2Q8TC59 973 aaKnown RBP11.06□□□□□ -0.64
COL6A1-205ENST00000492851 FBXW5Q969U6 566 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 PKNOX2Q96KN3 472 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 PPP1R36Q96LQ0 422 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 SMR3AQ99954 134 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms