RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 TMEM251Q8N6I4 163 aa16.91■□□□□ 0.3
MCF2L-230ENST00000491028 DNAJA4Q8WW22 397 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-230ENST00000491028 MRGPRX4Q96LA9 322 aa16.91■□□□□ 0.3
MCF2L-230ENST00000491028 OR2B2Q9GZK3 357 aa16.91■□□□□ 0.3
MCF2L-230ENST00000491028 C12orf10Q9HB07 376 aa16.91■□□□□ 0.3
MCF2L-230ENST00000491028 SELENONQ9NZV5 590 aa16.91■□□□□ 0.3
MCF2L-230ENST00000491028 VDAC3Q9Y277 283 aa16.91■□□□□ 0.3
MCF2L-230ENST00000491028 LAMA5O15230 3695 aa16.91■□□□□ 0.3
MCF2L-230ENST00000491028 A0A0B4J2E0 115 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 A0A1B0GWA3 101 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 A0A1B0GX12 115 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 H3BNX3 289 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 J3KTA2 159 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 ADAMDEC1O15204 470 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 CHP2O43745 196 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 TIPRLO75663 272 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 CST1P01037 141 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 HPNP05981 417 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 RFPL3SP0C7P2 107 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 ZNF17P17021 662 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 ZNF24P17028 368 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 HK1P19367 917 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 MST1P26927 711 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 ADH6P28332 368 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 EIF1P41567 113 aaKnown RBP16.9■□□□□ 0.3
MCF2L-230ENST00000491028 YAP1P46937 504 aaKnown RBP16.9■□□□□ 0.3
MCF2L-230ENST00000491028 SESN3P58005 492 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 ST3GAL3Q11203 375 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 PIN1Q13526 163 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-230ENST00000491028 PLEKHN1Q494U1 663 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-230ENST00000491028 ULK3Q6PHR2 472 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 ZNF605Q86T29 641 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 C3orf49Q96BT1 292 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 SLC41A3Q96GZ6 507 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 FNDC11Q9BVV2 318 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 PRR14Q9BWN1 585 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 ANKRD19PQ9H560 264 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 CTPS2Q9NRF8 586 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 NTNG1Q9Y2I2 539 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 PCNX3Q9H6A9 2034 aa16.9■□□□□ 0.3
MCF2L-230ENST00000491028 ZZEF1O43149 2961 aa16.89■□□□□ 0.3
MCF2L-230ENST00000491028 FAM166BA8MTA8 275 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 FFAR1O14842 300 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 DEAF1O75398 565 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-230ENST00000491028 KRT36O76013 467 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 DIRAS1O95057 198 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 NTN1O95631 604 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 FASP25445 335 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 RFC3P40938 356 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 POLR2HP52434 150 aaKnown RBP16.89■□□□□ 0.29
MCF2L-230ENST00000491028 SMIM11AP58511 58 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 PPIAP62937 165 aaKnown RBP16.89■□□□□ 0.29
MCF2L-230ENST00000491028 FOXF1Q12946 379 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 GK3PQ14409 553 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 TOMM20Q15388 145 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 NADK2Q4G0N4 442 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 ALG10BQ5I7T1 473 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 OR2T5Q6IEZ7 315 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 TSPYL5Q86VY4 417 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-230ENST00000491028 GTPBP8Q8N3Z3 284 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-230ENST00000491028 PIK3C3Q8NEB9 887 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 OR2T29Q8NH02 315 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 DHRS1Q96LJ7 313 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 ADAM19Q9H013 955 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 DNAJB9Q9UBS3 223 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 RIMS3Q9UJD0 308 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 NCKAP5O14513 1909 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 PKD1L2Q7Z442 2459 aa16.89■□□□□ 0.29
MCF2L-230ENST00000491028 TFECO14948 347 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-230ENST00000491028 CRYABP02511 175 aaKnown RBP16.88■□□□□ 0.29
MCF2L-230ENST00000491028 H1F0P07305 194 aaKnown RBP16.88■□□□□ 0.29
MCF2L-230ENST00000491028 PNMTP11086 282 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 ELK4P28324 431 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 APOBEC1P41238 236 aaKnown RBP16.88■□□□□ 0.29
MCF2L-230ENST00000491028 MAGEA5P43359 124 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 PMP22Q01453 160 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 SPIBQ01892 262 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 KLRB1Q12918 225 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 TRAM2Q15035 370 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 ATP6AP1Q15904 470 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 COLEC12Q5KU26 742 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 GDF7Q7Z4P5 450 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 ATG4DQ86TL0 474 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-230ENST00000491028 TEX19Q8NA77 164 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 FAM83FQ8NEG4 500 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-230ENST00000491028 OR14L1PQ8NHC6 308 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 ZNF524Q96C55 264 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 MPP4Q96JB8 637 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 PIGQQ9BRB3 760 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 ZDHHC11Q9H8X9 412 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 NMNAT1Q9HAN9 279 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-230ENST00000491028 ACKR4Q9NPB9 350 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 SLC7A7Q9UM01 511 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 TESMINQ9Y4I5 508 aa16.88■□□□□ 0.29
MCF2L-230ENST00000491028 DSPP15924 2871 aaKnown RBP16.87■□□□□ 0.29
MCF2L-230ENST00000491028 A0A1W2PRQ8 180 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 CLOCKO15516 846 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 ZIC3O60481 467 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 TRAPPC6AO75865 159 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 LDLRP01130 860 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms