RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 SEMA4FO95754 770 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 IGLV1-44P01699 117 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 HEXBP07686 556 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 APRTP07741 180 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 STSP08842 583 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 GOLGA8HP0CJ92 632 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 TCN2P20062 427 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 PRDX2P32119 198 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 NUMBP49757 651 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 RPS27AP62979 156 aaKnown RBP4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 CYCSP99999 105 aaKnown RBP4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 CDKN3Q16667 212 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 ECSCRQ19T08 205 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 GUSBP11Q6P575 273 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 FRRS1Q6ZNA5 592 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 ASRGL1Q7L266 308 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 SYVN1Q86TM6 617 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 KCNMB4Q86W47 210 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 TBC1D10CQ8IV04 446 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 HSCBQ8IWL3 235 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 LINC00518Q8N0U6 118 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 SLC25A45Q8N413 288 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 RNF148Q8N7C7 305 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 ICA1LQ8NDH6 482 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 C11orf45Q8TAV5 145 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 STARD8Q92502 1023 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 KIAA1143Q96AT1 154 aaPredicted RBP4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 ART5Q96L15 291 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 TNFRSF13CQ96RJ3 184 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 KRT12Q99456 494 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 OVOL2Q9BRP0 275 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 TMEM121Q9BTD3 319 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 PINK1Q9BXM7 581 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 NLNQ9BYT8 704 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 LINC00597Q9H2U6 94 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 ACTR8Q9H981 624 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 LRTM1Q9HBL6 345 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 POLE3Q9NRF9 147 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 BLOC1S6Q9UL45 172 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 NYNRINQ9P2P1 1898 aaKnown RBP4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 STAB2Q8WWQ8 2551 aa4.04□□□□□ -1.76
SSX2IP-208ENST00000490476 A0A087WYN8 130 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 IGKV6D-21A0A0A0MT36 114 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 G3V2L1 256 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 TMX2-CTNND1H3BSU7 103 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 K7EQD1 137 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 DPM1O60762 260 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 IGHV4-34P06331 123 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 ADORA3P0DMS8 318 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 TOP1P11387 765 aaKnown RBP4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 CYP11B1P15538 503 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 SELEP16581 610 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 CALRP27797 417 aaKnown RBP4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 RPL9P32969 192 aaKnown RBP4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 UGT1A3P35503 534 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 NOVP48745 357 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 ZNF131P52739 623 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 SNX1Q13596 522 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 KLF5Q13887 457 aaPredicted RBP4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 DPYSQ14117 519 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 KIAA0141Q14154 515 aaPredicted RBP4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 SLC17A1Q14916 467 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 ATF7IP2Q5U623 682 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 C1orf189Q5VU69 101 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 GALNT17Q6IS24 598 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 TRIM65Q6PJ69 517 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 CWC27Q6UX04 472 aaKnown RBP4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 SLC22A16Q86VW1 577 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 MLKLQ8NB16 471 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 ACBD4Q8NC06 268 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 OR6F1Q8NGZ6 308 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 GOLGA5Q8TBA6 731 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 HCAR2Q8TDS4 363 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 TMEM37Q8WXS4 190 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 DUX3Q96PT4 197 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 LIME1Q9H400 295 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 NXF3Q9H4D5 531 aaKnown RBP4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 WDR41Q9HAD4 459 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 LY9Q9HBG7 655 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 ZNF302Q9NR11 478 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 TMEM181Q9P2C4 612 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 RCOR3Q9P2K3 495 aaPredicted RBP4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 LHX3Q9UBR4 397 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 EXOGQ9Y2C4 368 aaKnown RBP4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 SLC6A5Q9Y345 797 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 MRPS18CQ9Y3D5 142 aaKnown RBP4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 WIPI2Q9Y4P8 454 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 RNF215Q9Y6U7 377 aa4.03□□□□□ -1.76
SSX2IP-208ENST00000490476 DNAH1Q9P2D7 4330 aa4.02□□□□□ -1.77
SSX2IP-208ENST00000490476 LOC390937A0A1W2PQ73 354 aa4.02□□□□□ -1.77
SSX2IP-208ENST00000490476 D6RAR5 112 aa4.02□□□□□ -1.77
SSX2IP-208ENST00000490476 LGALS8O00214 317 aa4.02□□□□□ -1.77
SSX2IP-208ENST00000490476 E2F3O00716 465 aa4.02□□□□□ -1.77
SSX2IP-208ENST00000490476 CFLARO15519 480 aa4.02□□□□□ -1.77
SSX2IP-208ENST00000490476 TRAPPC3O43617 180 aa4.02□□□□□ -1.77
SSX2IP-208ENST00000490476 B3GAT3O94766 335 aa4.02□□□□□ -1.77
SSX2IP-208ENST00000490476 AK1P00568 194 aa4.02□□□□□ -1.77
SSX2IP-208ENST00000490476 FHP07954 510 aa4.02□□□□□ -1.77
SSX2IP-208ENST00000490476 ZSCAN5DPP0CG00 497 aa4.02□□□□□ -1.77
SSX2IP-208ENST00000490476 GIMD1P0DJR0 217 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms