RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 A0A096LPI6 279 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 BCHEP06276 602 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 ME2P23368 584 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 CPA2P48052 419 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 ATP4BP51164 291 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 DSTNP60981 165 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 MERTKQ12866 999 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 ZNF239Q16600 458 aaKnown RBP16.21■□□□□ 0.19
COL9A3-214ENST00000490398 CGB2Q6NT52 195 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 PLEKHM3Q6ZWE6 761 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 SLC38A5Q8WUX1 472 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 MAL2Q969L2 176 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 DNAJA3Q96EY1 480 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 TMEM19Q96HH6 336 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 GPATCH1Q9BRR8 931 aaKnown RBP16.21■□□□□ 0.19
COL9A3-214ENST00000490398 IKZF5Q9H5V7 419 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.21■□□□□ 0.19
COL9A3-214ENST00000490398 ACER3Q9NUN7 267 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 RLIMQ9NVW2 624 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 STOML1Q9UBI4 398 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 FOXD3Q9UJU5 478 aaPredicted RBP16.21■□□□□ 0.19
COL9A3-214ENST00000490398 SLC35A3Q9Y2D2 325 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 CHST2Q9Y4C5 530 aa16.21■□□□□ 0.19
COL9A3-214ENST00000490398 DSPPQ9NZW4 1301 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 TRBV5-3A0A0A0MS03 114 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 IGHV3-15A0A0B4J1V0 119 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 CLIC1O00299 241 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 MSTNO14793 375 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 SS18L1O75177 396 aaPredicted RBP16.2■□□□□ 0.18
COL9A3-214ENST00000490398 CTAG2O75638 210 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 SYNGR4O95473 234 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 NCF2P19878 526 aaPredicted RBP16.2■□□□□ 0.18
COL9A3-214ENST00000490398 PGCP20142 388 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 ENPP1P22413 925 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 CCKARP32238 428 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 SELENBP1Q13228 472 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 SQLEQ14534 574 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 LRIF1Q5T3J3 769 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 FAM214BQ7L5A3 538 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 TMEM200AQ86VY9 491 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 LURAP1LQ8IV03 231 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 ABHD3Q8WU67 409 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 ST8SIA1Q92185 356 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 MTHFD2LQ9H903 347 aaPredicted RBP16.2■□□□□ 0.18
COL9A3-214ENST00000490398 CTPS2Q9NRF8 586 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 VAPAQ9P0L0 249 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 P2RX2Q9UBL9 471 aa16.2■□□□□ 0.18
COL9A3-214ENST00000490398 MCTS1Q9ULC4 181 aaKnown RBP16.2■□□□□ 0.18
COL9A3-214ENST00000490398 FAM221AA4D161 298 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 TUBAL3A6NHL2 446 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 ANXA11P50995 505 aaKnown RBP16.19■□□□□ 0.18
COL9A3-214ENST00000490398 TXNL4AP83876 142 aaKnown RBP16.19■□□□□ 0.18
COL9A3-214ENST00000490398 SORDQ00796 357 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 RGNQ15493 299 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 MRPL2Q5T653 305 aaKnown RBP16.19■□□□□ 0.18
COL9A3-214ENST00000490398 ZNF836Q6ZNA1 936 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 C22orf34Q6ZV56 151 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 ARFGAP2Q8N6H7 521 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 FAM222BQ8WU58 562 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 WDR60Q8WVS4 1066 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 OIT3Q8WWZ8 545 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 LRRC46Q96FV0 321 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 CCDC106Q9BWC9 280 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 EXOSC3Q9NQT5 275 aaKnown RBP16.19■□□□□ 0.18
COL9A3-214ENST00000490398 ING1Q9UK53 422 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-214ENST00000490398 CELSR1Q9NYQ6 3014 aa16.19■□□□□ 0.18
COL9A3-214ENST00000490398 A0A0G2JND7 137 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 DBIP07108 87 aaKnown RBP16.18■□□□□ 0.18
COL9A3-214ENST00000490398 CD8BP10966 210 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 FCGR2AP12318 317 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 IDH2P48735 452 aaKnown RBP16.18■□□□□ 0.18
COL9A3-214ENST00000490398 EEF1A1P68104 462 aaKnown RBP16.18■□□□□ 0.18
COL9A3-214ENST00000490398 EEF1A1P5Q5VTE0 462 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 DLEU7Q6UYE1 221 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 RETREG3Q86VR2 466 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 ADGRG3Q86Y34 549 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 KIF18BQ86Y91 864 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 CLIP4Q8N3C7 705 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 OR52P1PQ8NH57 321 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 ZNF563Q8TA94 476 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 RNF128Q8TEB7 428 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 STON2Q8WXE9 905 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 GMPPAQ96IJ6 420 aaPredicted RBP16.18■□□□□ 0.18
COL9A3-214ENST00000490398 OR5B2Q96R09 309 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 TMEM120AQ9BXJ8 343 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 OR11A1Q9GZK7 315 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 LIME1Q9H400 295 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 PAQR5Q9NXK6 330 aaPredicted RBP16.18■□□□□ 0.18
COL9A3-214ENST00000490398 PROCRQ9UNN8 238 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 SPG11Q96JI7 2443 aa16.18■□□□□ 0.18
COL9A3-214ENST00000490398 ZNF469Q96JG9 3925 aaPredicted RBP16.17■□□□□ 0.18
COL9A3-214ENST00000490398 CCDC168Q8NDH2 2452 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 A0A1W2PP18 115 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 A6NNC1 897 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 GKN3PP0CG01 181 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 EPXP11678 715 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 BMP2P12643 396 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 PRG2P13727 222 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 IL7RP16871 459 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 CCNA2P20248 432 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms