RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ETV2O00321 342 aaPredicted RBP15.6■□□□□ 0.09
SEC13-218ENST00000490283 TGDSO95455 350 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 NTN1O95631 604 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 HRGP04196 525 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 POLR2JP52435 117 aaKnown RBP15.6■□□□□ 0.09
SEC13-218ENST00000490283 SESN3P58005 492 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 KCNJ10P78508 379 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 CHRNEQ04844 493 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 KEAP1Q14145 624 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 POU4F3Q15319 338 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 TESK1Q15569 626 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 MAPK14Q16539 360 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 C6orf10Q5SRN2 563 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 LRRC74BQ6ZQY2 392 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 FCRLAQ7L513 359 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 MAVSQ7Z434 540 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 CMIPQ8IY22 773 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 SLC43A2Q8N370 569 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 PNPT1Q8TCS8 783 aaKnown RBP15.6■□□□□ 0.09
SEC13-218ENST00000490283 SLC25A43Q8WUT9 341 aaPredicted RBP15.6■□□□□ 0.09
SEC13-218ENST00000490283 PMM1Q92871 262 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 WFIKKN1Q96NZ8 548 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 OR5B2Q96R09 309 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 OR52B2Q96RD2 323 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 CACYBPQ9HB71 228 aaKnown RBP15.6■□□□□ 0.09
SEC13-218ENST00000490283 GP6Q9HCN6 339 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 CCM2LQ9NUG4 571 aaPredicted RBP15.6■□□□□ 0.09
SEC13-218ENST00000490283 ACER3Q9NUN7 267 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 PLEKHA6Q9Y2H5 1048 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 TACC2O95359 2948 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 OTOGQ6ZRI0 2925 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 SPG11Q96JI7 2443 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 EFNA2O43921 213 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 PRKD3O94806 890 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 RAF1P04049 648 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 UQCRBP14927 111 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 PPP3CBP16298 524 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 AGTR1P30556 359 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 RYKP34925 604 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 PGM1P36871 562 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 RAC3P60763 192 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 FUT5Q11128 374 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 EPGNQ6UW88 154 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 PAMR1Q6UXH9 720 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 ANKFN1Q8N957 763 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 FAM71CQ8NEG0 241 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 ABHD3Q8WU67 409 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 FOXC2Q99958 501 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 SRXN1Q9BYN0 137 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 QRSL1Q9H0R6 528 aaKnown RBP15.59■□□□□ 0.09
SEC13-218ENST00000490283 C12orf49Q9H741 205 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 MTHFD2LQ9H903 347 aaPredicted RBP15.59■□□□□ 0.09
SEC13-218ENST00000490283 TCF7L2Q9NQB0 619 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 EXOSC3Q9NQT5 275 aaKnown RBP15.59■□□□□ 0.09
SEC13-218ENST00000490283 CALML5Q9NZT1 146 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 KLHL9Q9P2J3 617 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 KLHL13Q9P2N7 655 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 P2RX2Q9UBL9 471 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 CSMD2Q7Z408 3487 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 PCNX3Q9H6A9 2034 aa15.59■□□□□ 0.09
SEC13-218ENST00000490283 A0A1W2PNR3 127 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 FAM234BA2RU67 622 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 HMGB1P1B2RPK0 211 aaPredicted RBP15.58■□□□□ 0.08
SEC13-218ENST00000490283 DNAJA2O60884 412 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 ZCCHC18P0CG32 403 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 TFPIP10646 304 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 IL7RP16871 459 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 ENPP1P22413 925 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 FKBP2P26885 142 aaKnown RBP15.58■□□□□ 0.08
SEC13-218ENST00000490283 APOBEC1P41238 236 aaKnown RBP15.58■□□□□ 0.08
SEC13-218ENST00000490283 CRATP43155 626 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 CSNK2A1P68400 391 aaPredicted RBP15.58■□□□□ 0.08
SEC13-218ENST00000490283 SYPL1Q16563 259 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 AP1ARQ63HQ0 302 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 PLEKHM3Q6ZWE6 761 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 GRINAQ7Z429 371 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 PEX5LQ8IYB4 626 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 WDR60Q8WVS4 1066 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 ZHX1-C8orf76Q96EF9 292 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 ZC3HAV1LQ96H79 300 aaKnown RBP15.58■□□□□ 0.08
SEC13-218ENST00000490283 LIME1Q9H400 295 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 COQ10BQ9H8M1 238 aa15.58■□□□□ 0.08
SEC13-218ENST00000490283 THUMPD1Q9NXG2 353 aaKnown RBP15.58■□□□□ 0.08
SEC13-218ENST00000490283 AGAP5A6NIR3 686 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 DBIP07108 87 aaKnown RBP15.57■□□□□ 0.08
SEC13-218ENST00000490283 CHRM4P08173 479 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 CRYGSP22914 178 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 CCKARP32238 428 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 HTR3AP46098 478 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 CRISP3P54108 245 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 SYT14P1Q58G82 188 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 TTMPQ5BVD1 217 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 COX20Q5RI15 118 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 ZNF550Q7Z398 422 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 HMGN2P46Q86SG4 172 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 OR9I1Q8NGQ6 314 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 PIK3IP1Q96FE7 263 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 SLC38A1Q9H2H9 487 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 RAD21L1Q9H4I0 556 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 TPT1P8Q9HAU6 139 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms