RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 WARS2Q9UGM6 360 aaKnown RBP2.74□□□□□ -1.97
CD46-216ENST00000490278 SCML2Q9UQR0 700 aa2.74□□□□□ -1.97
CD46-216ENST00000490278 ATP6V0A2Q9Y487 856 aa2.74□□□□□ -1.97
CD46-216ENST00000490278 FAM231BA6NCW3 169 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 E7ESA3 106 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 K7N7A8 449 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 KIF2AO00139 706 aaPredicted RBP2.73□□□□□ -1.97
CD46-216ENST00000490278 ZNF264O43296 627 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 PRKYO43930 277 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 ECI2O75521 394 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 SLITRK3O94933 977 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 LRATO95237 230 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 ACTL6AO96019 429 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 IGHV3-48P01763 117 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 RPA2P15927 270 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 ELK1P19419 428 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 UQCRC2P22695 453 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 AQP1P29972 269 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 RGS4P49798 205 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 PRKXP51817 358 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 PLK1P53350 603 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 ORC2Q13416 577 aaPredicted RBP2.73□□□□□ -1.97
CD46-216ENST00000490278 GGTA1PQ4G0N0 100 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 OTPQ5XKR4 325 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 MOB3BQ86TA1 216 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 ERI1Q8IV48 349 aaKnown RBP2.73□□□□□ -1.97
CD46-216ENST00000490278 ALLCQ8N6M5 410 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 SYT14Q8NB59 555 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 PAQR8Q8TEZ7 354 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 TCTEX1D2Q8WW35 142 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 CTNNBL1Q8WYA6 563 aaPredicted RBP2.73□□□□□ -1.97
CD46-216ENST00000490278 RSPH1Q8WYR4 309 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 SH3YL1Q96HL8 342 aaPredicted RBP2.73□□□□□ -1.97
CD46-216ENST00000490278 C7orf34Q96L11 122 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 SENP8Q96LD8 212 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 KRTAP4-3Q9BYR4 195 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 RAB33BQ9H082 229 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 SMYD3Q9H7B4 428 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 ABCB10Q9NRK6 738 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 ANAPC11Q9NYG5 84 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 CD274Q9NZQ7 290 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 TBK1Q9UHD2 729 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 LRRK1Q38SD2 2015 aa2.73□□□□□ -1.97
CD46-216ENST00000490278 KIF16BQ96L93 1317 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 BTN3A3O00478 584 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 RS1O15537 224 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 MMP23AO75900 390 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 KIAA0754O94854 1291 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 TIMP1P01033 207 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 GABRR1P24046 479 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 PSMA5P28066 241 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 ADSSP30520 456 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 OTX2P32243 289 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 PPT1P50897 306 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 CBX1P83916 185 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 CCDC173Q0VFZ6 552 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 MESDQ14696 234 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 ATL3Q6DD88 541 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 KCNIP4Q6PIL6 250 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 CCDC137Q6PK04 289 aaKnown RBP2.72□□□□□ -1.97
CD46-216ENST00000490278 ARCQ7LC44 396 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 SLC38A6Q8IZM9 456 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 SVOPLQ8N434 492 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 TMEM252Q8N6L7 170 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 Q8N7P7 452 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 OR2AP1Q8NGE2 309 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 MRPS31Q92665 395 aaKnown RBP2.72□□□□□ -1.97
CD46-216ENST00000490278 IMMP1LQ96LU5 166 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 AMDHD1Q96NU7 426 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 PLEKHF1Q96S99 279 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 SLC35A5Q9BS91 424 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 EDEM2Q9BV94 578 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 RHBGQ9H310 441 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 RMND5AQ9H871 391 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 NUDT15Q9NV35 164 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 SIGLEC8Q9NYZ4 499 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 NYAP2Q9P242 653 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 RNF14Q9UBS8 474 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 BLOC1S6Q9UL45 172 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 RPH3ALQ9UNE2 315 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 SNX6Q9UNH7 406 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 RASD1Q9Y272 281 aa2.72□□□□□ -1.97
CD46-216ENST00000490278 RAI1Q7Z5J4 1906 aaPredicted RBP2.72□□□□□ -1.97
CD46-216ENST00000490278 MBLAC1A4D2B0 266 aaPredicted RBP2.71□□□□□ -1.98
CD46-216ENST00000490278 H0Y9J4 135 aa2.71□□□□□ -1.98
CD46-216ENST00000490278 EMC8O43402 210 aa2.71□□□□□ -1.98
CD46-216ENST00000490278 BBOX1O75936 387 aa2.71□□□□□ -1.98
CD46-216ENST00000490278 IGLV1-47P01700 117 aa2.71□□□□□ -1.98
CD46-216ENST00000490278 UGT2B4P06133 528 aa2.71□□□□□ -1.98
CD46-216ENST00000490278 FGF9P31371 208 aaPredicted RBP2.71□□□□□ -1.98
CD46-216ENST00000490278 YWHABP31946 246 aaKnown RBP2.71□□□□□ -1.98
CD46-216ENST00000490278 DRD3P35462 400 aa2.71□□□□□ -1.98
CD46-216ENST00000490278 HNRNPA3P51991 378 aaKnown RBP2.71□□□□□ -1.98
CD46-216ENST00000490278 HSPA2P54652 639 aa2.71□□□□□ -1.98
CD46-216ENST00000490278 WNT4P56705 351 aa2.71□□□□□ -1.98
CD46-216ENST00000490278 HSD17B7P56937 341 aa2.71□□□□□ -1.98
CD46-216ENST00000490278 TAF7Q15545 349 aaPredicted RBP2.71□□□□□ -1.98
CD46-216ENST00000490278 IL17AQ16552 155 aa2.71□□□□□ -1.98
CD46-216ENST00000490278 CCDC14Q49A88 953 aa2.71□□□□□ -1.98
CD46-216ENST00000490278 TTC23Q5W5X9 447 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms