RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 AK1P00568 194 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 UQCRC2P22695 453 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 DNASE1P24855 282 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 NME5P56597 212 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 SESN3P58005 492 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 CHRNEQ04844 493 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 KRTAP1-1Q07627 177 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 STX3Q13277 289 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 GPR68Q15743 365 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 SYPL1Q16563 259 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 DPY19L1Q2PZI1 675 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 KRTAP21-3Q3LHN1 58 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 SPDYE7PQ495Y7 208 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 COMTD1Q86VU5 262 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 TUSC5Q8IXB3 177 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 MSRB3Q8IXL7 192 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 CIARTQ8N365 385 aaPredicted RBP10.49□□□□□ -0.73
SRSF4-204ENST00000489898 OIT3Q8WWZ8 545 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 ST8SIA1Q92185 356 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 CNOT9Q92600 299 aaKnown RBP10.49□□□□□ -0.73
SRSF4-204ENST00000489898 OSTF1Q92882 214 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 CPNE4Q96A23 557 aaPredicted RBP10.49□□□□□ -0.73
SRSF4-204ENST00000489898 PIK3IP1Q96FE7 263 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 SLC35A5Q9BS91 424 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 DPY30Q9C005 99 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 HOXD1Q9GZZ0 328 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 C12orf49Q9H741 205 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 TMBIM4Q9HC24 238 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 EXOSC3Q9NQT5 275 aaKnown RBP10.49□□□□□ -0.73
SRSF4-204ENST00000489898 PAQR5Q9NXK6 330 aaPredicted RBP10.49□□□□□ -0.73
SRSF4-204ENST00000489898 NPAP1Q9NZP6 1156 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 MCTS1Q9ULC4 181 aaKnown RBP10.49□□□□□ -0.73
SRSF4-204ENST00000489898 CSPG4Q6UVK1 2322 aa10.49□□□□□ -0.73
SRSF4-204ENST00000489898 SONP18583 2426 aaKnown RBP10.48□□□□□ -0.73
SRSF4-204ENST00000489898 IGKV3D-15A0A087WSY6 115 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 GOLGA8QA0A0J9YX86 632 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 GOLGA8OA6NCC3 632 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 GOLGA8NF8WBI6 632 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 HDAC3O15379 428 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 CFLARO15519 480 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 FZD7O75084 574 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 PGRP06401 933 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 UBTFL6P0CB48 400 aaPredicted RBP10.48□□□□□ -0.73
SRSF4-204ENST00000489898 CD99P14209 185 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 PAX1P15863 534 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 DDX5P17844 614 aaKnown RBP10.48□□□□□ -0.73
SRSF4-204ENST00000489898 ATP6V1C1P21283 382 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 MRPL19P49406 292 aaKnown RBP10.48□□□□□ -0.73
SRSF4-204ENST00000489898 FOXG1P55316 489 aaPredicted RBP10.48□□□□□ -0.73
SRSF4-204ENST00000489898 H3F3AP84243 136 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 TMEM176BQ3YBM2 270 aaPredicted RBP10.48□□□□□ -0.73
SRSF4-204ENST00000489898 TIGD2Q4W5G0 525 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 C3orf33Q6P1S2 294 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 FCRLAQ7L513 359 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.48□□□□□ -0.73
SRSF4-204ENST00000489898 RNF130Q86XS8 419 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 ZNF619Q8N2I2 560 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 ANKRD42Q8N9B4 389 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 ARL8AQ96BM9 186 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 ZC3HAV1LQ96H79 300 aaKnown RBP10.48□□□□□ -0.73
SRSF4-204ENST00000489898 ARL5BQ96KC2 179 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 COX4I2Q96KJ9 171 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 PIP5K1AQ99755 562 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 MED18Q9BUE0 208 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 THUMPD3Q9BV44 507 aaKnown RBP10.48□□□□□ -0.73
SRSF4-204ENST00000489898 ACTR6Q9GZN1 396 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 OR10A4Q9H209 315 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 GP6Q9HCN6 339 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 HHATLQ9HCP6 504 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 POLE3Q9NRF9 147 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 SDR39U1Q9NRG7 319 aaPredicted RBP10.48□□□□□ -0.73
SRSF4-204ENST00000489898 ACER3Q9NUN7 267 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 BEX4Q9NWD9 120 aaPredicted RBP10.48□□□□□ -0.73
SRSF4-204ENST00000489898 PRSS50Q9UI38 385 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 EMC9Q9Y3B6 208 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 WDR45Q9Y484 360 aa10.48□□□□□ -0.73
SRSF4-204ENST00000489898 TRBV5-3A0A0A0MS03 114 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 ZC3H12DA2A288 527 aaKnown RBP10.47□□□□□ -0.73
SRSF4-204ENST00000489898 AGAP5A6NIR3 686 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 PDLIM1O00151 329 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 KLF11O14901 512 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 DIAPH2O60879 1101 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 CSTAP01040 98 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 FESP07332 822 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 OR3A2P47893 321 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 KHKP50053 298 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 CLNS1AP54105 237 aaKnown RBP10.47□□□□□ -0.73
SRSF4-204ENST00000489898 RAC3P60763 192 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 MAGOHP61326 146 aaKnown RBP10.47□□□□□ -0.73
SRSF4-204ENST00000489898 CBFBQ13951 182 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 TAB1Q15750 504 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 SGCBQ16585 318 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 EXOC3L2Q2M3D2 409 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 PDCD4Q53EL6 469 aaKnown RBP10.47□□□□□ -0.73
SRSF4-204ENST00000489898 SYT14P1Q58G82 188 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 TTMPQ5BVD1 217 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 DNAJC14Q6Y2X3 702 aaPredicted RBP10.47□□□□□ -0.73
SRSF4-204ENST00000489898 ADGRG3Q86Y34 549 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 FUNDC1Q8IVP5 155 aa10.47□□□□□ -0.73
SRSF4-204ENST00000489898 ZNF614Q8N883 585 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms