RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SLC7A5P1Q8MH63 180 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 TEX26Q8N6G2 289 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 MLKLQ8NB16 471 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 KBTBD8Q8NFY9 601 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 PHLDA1Q8WV24 401 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 C17orf50Q8WW18 174 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SORCS1Q8WY21 1168 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 HSD17B8Q92506 261 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 MRPL24Q96A35 216 aaKnown RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 PINX1Q96BK5 328 aaKnown RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 UPRTQ96BW1 309 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ASB9Q96DX5 294 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF274Q96GC6 653 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 MSANTD3Q96H12 275 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ARL5BQ96KC2 179 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 C4orf45Q96LM5 186 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 AGAP4Q96P64 663 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 FUCA2Q9BTY2 467 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 CCDC94Q9BW85 323 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC25A51Q9H1U9 297 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 GAL3ST2Q9H3Q3 398 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ALG9Q9H6U8 611 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 UGT1A10Q9HAW8 530 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 LZTFL1Q9NQ48 299 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC17A5Q9NRA2 495 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 INPP5EQ9NRR6 644 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 TMEM30AQ9NV96 361 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 MRPL22Q9NWU5 206 aaKnown RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC12A6Q9UHW9 1150 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 FZR1Q9UM11 496 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 PRPF19Q9UMS4 504 aaKnown RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SCML1Q9UN30 329 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 POFUT2Q9Y2G5 429 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 CICQ96RK0 1608 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 MYO3BQ8WXR4 1341 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 USP42Q9H9J4 1324 aaKnown RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 PRR23AA6NEV1 266 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 TRDMT1O14717 391 aaKnown RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 ZBTB5O15062 677 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 BUD23O43709 281 aaKnown RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 XPNPEP2O43895 674 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 TOXO94900 526 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 YEATS4O95619 227 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 TSPAN13O95857 204 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 F10P00742 488 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 OAS1P00973 400 aaKnown RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 SERPINE2P07093 398 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 GP1BBP13224 206 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 CCNB1P14635 433 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 IDSP22304 550 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 CDH5P33151 784 aaPredicted RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 ALDH3B1P43353 468 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 P2RY1P47900 373 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 DNA2P51530 1060 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 PRELPP51888 382 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 LBX1P52954 281 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 CDH11P55287 796 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 PLP1P60201 277 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 PAX5Q02548 391 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF155Q12901 538 aaPredicted RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 MFAP5Q13361 173 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 PPP1R3AQ16821 1122 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 TP53I3Q53FA7 332 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 PLPP4Q5VZY2 271 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 AP1ARQ63HQ0 302 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 OR52W1Q6IF63 320 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 Q6ZSR3 168 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 C9orf139Q6ZV77 190 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 SMIM29Q86T20 159 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 NELFCDQ8IXH7 590 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 MYOCDQ8IZQ8 938 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 PYROXD2Q8N2H3 581 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 CSNK1A1LQ8N752 337 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF565Q8N9K5 539 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 CATSPER1Q8NEC5 780 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 STXBP6Q8NFX7 210 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 OR1J1Q8NGS3 322 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 OR52N5Q8NH56 324 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 DTX3LQ8TDB6 740 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 ACMSDQ8TDX5 336 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 MITD1Q8WV92 249 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 ANP32BQ92688 251 aaKnown RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 BADQ92934 168 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 SGK3Q96BR1 496 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 MTBPQ96DY7 904 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 TIMD4Q96H15 378 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 TSSK3Q96PN8 268 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 ACBD6Q9BR61 282 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 CENPKQ9BS16 269 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 CCM2Q9BSQ5 444 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 DPH7Q9BTV6 452 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 C20orf24Q9BUV8 137 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 CHID1Q9BWS9 393 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 PARD6BQ9BYG5 372 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 UPF3BQ9BZI7 483 aaKnown RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 MFFQ9GZY8 342 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 POLR3FQ9H1D9 316 aaPredicted RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 MTHFD2LQ9H903 347 aaPredicted RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 LY9Q9HBG7 655 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 LPAR2Q9HBW0 351 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms