RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 RAB8BQ92930 207 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 ZNF681Q96N22 645 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 OR5B2Q96R09 309 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 GATA5Q9BWX5 397 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-233ENST00000489352 MRPL1Q9BYD6 325 aaKnown RBP9.91□□□□□ -0.82
HDAC6-233ENST00000489352 ASH2LQ9UBL3 628 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 OR6C65A6NJZ3 312 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 ALG1L2C9J202 215 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 M0R233 179 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 SYNGR3O43761 229 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 PLOD3O60568 738 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 LINGO3P0C6S8 592 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 MPIP34949 423 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 RAD52P43351 418 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 TAS2R39P59534 338 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 UBE2NP61088 152 aaKnown RBP9.9□□□□□ -0.82
HDAC6-233ENST00000489352 LCN2P80188 198 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 NAAAQ02083 359 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 TTC19Q6DKK2 380 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-233ENST00000489352 ANKRD16Q6P6B7 361 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 FAM9CQ8IZT9 166 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 OR7G2Q8NG99 324 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 ZHX1-C8orf76Q96EF9 292 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 HES6Q96HZ4 224 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 MRGPRX4Q96LA9 322 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 OBP2BQ9NPH6 170 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 TNFRSF19Q9NS68 423 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 CMAHPQ9Y471 501 aa9.9□□□□□ -0.82
HDAC6-233ENST00000489352 GPC6Q9Y625 555 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-233ENST00000489352 TMEM129A0AVI4 362 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 SCDO00767 359 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 EFNA2O43921 213 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 OXSR1O95747 527 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-233ENST00000489352 GSNP06396 782 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 ALOX5P09917 674 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 GABRA3P34903 492 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 PIK3CGP48736 1102 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 KRTAP10-3P60369 221 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 ATP6V0D1P61421 351 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 CSNK2A1P68400 391 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-233ENST00000489352 COL10A1Q03692 680 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 SELENBP1Q13228 472 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 OR4D1Q15615 310 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 HIKESHIQ53FT3 197 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 AVPI1Q5T686 147 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 FIP1L1Q6UN15 594 aaKnown RBP9.89□□□□□ -0.83
HDAC6-233ENST00000489352 CASP12Q6UXS9 341 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 ADGRG3Q86Y34 549 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 AGGF1Q8N302 714 aaeCLIP9.89□□□□□ -0.83
HDAC6-233ENST00000489352 GLB1L3Q8NCI6 653 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-233ENST00000489352 SLC16A11Q8NCK7 471 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 JADE3Q92613 823 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 ZDHHC16Q969W1 377 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 EXOSC8Q96B26 276 aaKnown RBP9.89□□□□□ -0.83
HDAC6-233ENST00000489352 TM4SF18Q96CE8 201 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 NAT9Q9BTE0 207 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 POPDC3Q9HBV1 291 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 PARPBPQ9NWS1 579 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 AURKAIP1Q9NWT8 199 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-233ENST00000489352 ZKSCAN5Q9Y2L8 839 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 AUP1Q9Y679 476 aa9.89□□□□□ -0.83
HDAC6-233ENST00000489352 IGKV3D-15A0A087WSY6 115 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 SUPT3HB4E1H0 165 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 SULT2B1O00204 365 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 DHHO43323 396 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 HOXA3O43365 443 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-233ENST00000489352 SUPT3HO75486 399 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 NDUFA7O95182 113 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 KRT14P02533 472 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 OPN1MWP04001 364 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 OPN1MW2P0DN77 364 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 OPN1MW3P0DN78 364 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 MPGP29372 298 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 TIA1P31483 386 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDAC6-233ENST00000489352 PRIM2P49643 509 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 MRPS11P82912 194 aaKnown RBP9.88□□□□□ -0.83
HDAC6-233ENST00000489352 POU3F1Q03052 451 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-233ENST00000489352 SLC29A2Q14542 456 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 PDK3Q15120 406 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 TUSC1Q2TAM9 212 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 GLE1Q53GS7 698 aaKnown RBP9.88□□□□□ -0.83
HDAC6-233ENST00000489352 COMMD6Q7Z4G1 85 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 MMGT1Q8N4V1 131 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 OR4C3Q8NH37 302 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 WDR20Q8TBZ3 569 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 ST7LQ8TDW4 575 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 MAIP1Q8WWC4 291 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 YIPF5Q969M3 257 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 MRI1Q9BV20 369 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 MOV10Q9HCE1 1003 aaKnown RBP9.88□□□□□ -0.83
HDAC6-233ENST00000489352 C1RLQ9NZP8 487 aa9.88□□□□□ -0.83
HDAC6-233ENST00000489352 NOTCH3Q9UM47 2321 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 UGDHO60701 494 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 KRT33AO76009 404 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 MPIG6BO95866 241 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 IGHV2-5P01817 119 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 CECR9P0C854 216 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 CALCRP30988 508 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 MAGEA3P43357 314 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 DIO1P49895 249 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms