RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 A0A1W2PP18 115 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 HNRNPCL2B2RXH8 293 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 HNRNPCL3B7ZW38 293 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 MSTNO14793 375 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 ANGPT2O15123 496 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 HNRNPCL1O60812 293 aaKnown RBP12.82□□□□□ -0.36
BRCA1-218ENST00000489037 HNRNPCL4P0DMR1 293 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 ARFIP2P53365 341 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 DLX5P56178 289 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 SESN3P58005 492 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 MERTKQ12866 999 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 LARS2Q15031 903 aaKnown RBP12.82□□□□□ -0.36
BRCA1-218ENST00000489037 RGNQ15493 299 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 ZSWIM7Q19AV6 140 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 LIN52Q52LA3 116 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 LRIF1Q5T3J3 769 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 C3orf33Q6P1S2 294 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 HMGN2P46Q86SG4 172 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 ZNF440Q8IYI8 595 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 ZNF295-AS1Q8N0V1 137 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 OR52P1PQ8NH57 321 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 CPNE4Q96A23 557 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-218ENST00000489037 ADGRG7Q96K78 797 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 TMEM120AQ9BXJ8 343 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 QRSL1Q9H0R6 528 aaKnown RBP12.82□□□□□ -0.36
BRCA1-218ENST00000489037 MCCC2Q9HCC0 563 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 JKAMPQ9P055 326 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-218ENST00000489037 PROCRQ9UNN8 238 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 NDUFAF1Q9Y375 327 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 ABCA12Q86UK0 2595 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 TUBAL3A6NHL2 446 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 DNAJA2O60884 412 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 TNFSF13O75888 250 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 TFPTP0C1Z6 253 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 NID1P14543 1247 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 CAPN3P20807 821 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 IL11P20809 199 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 FKBP2P26885 142 aaKnown RBP12.81□□□□□ -0.36
BRCA1-218ENST00000489037 APOBEC1P41238 236 aaKnown RBP12.81□□□□□ -0.36
BRCA1-218ENST00000489037 HTR3AP46098 478 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 MVDP53602 400 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 SORDQ00796 357 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 CTU2Q2VPK5 515 aaKnown RBP12.81□□□□□ -0.36
BRCA1-218ENST00000489037 FAM71CQ8NEG0 241 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 TSPEARQ8WU66 669 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 SLC25A43Q8WUT9 341 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-218ENST00000489037 SLC38A5Q8WUX1 472 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 TMEM19Q96HH6 336 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 GMPPAQ96IJ6 420 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-218ENST00000489037 SLC39A3Q9BRY0 314 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 FANCFQ9NPI8 374 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 FGFR1OP2Q9NVK5 253 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 PRDM4Q9UKN5 801 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 IFT52Q9Y366 437 aa12.81□□□□□ -0.36
BRCA1-218ENST00000489037 A8MXE2 369 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 ETV2O00321 342 aaPredicted RBP12.8□□□□□ -0.36
BRCA1-218ENST00000489037 EFNA2O43921 213 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 AQP8O94778 261 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 NTN1O95631 604 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 TFPIP10646 304 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 RPS4Y1P22090 263 aaKnown RBP12.8□□□□□ -0.36
BRCA1-218ENST00000489037 CPOXP36551 454 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 KIR2DL2P43627 348 aaPredicted RBP12.8□□□□□ -0.36
BRCA1-218ENST00000489037 KCNJ5P48544 419 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 IDH2P48735 452 aaKnown RBP12.8□□□□□ -0.36
BRCA1-218ENST00000489037 COPZ1P61923 177 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 RNPS1Q15287 305 aaKnown RBP12.8□□□□□ -0.36
BRCA1-218ENST00000489037 PAGE3Q5JUK9 113 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 GCNT6Q5T4J0 391 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 MRPL2Q5T653 305 aaKnown RBP12.8□□□□□ -0.36
BRCA1-218ENST00000489037 PRAMEF8Q5VWM4 474 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 PRAMEF7Q5VXH5 474 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 VWA1Q6PCB0 445 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 PLEKHM3Q6ZWE6 761 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 FAM214BQ7L5A3 538 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 GRINAQ7Z429 371 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 TMEM200AQ86VY9 491 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 ZZZ3Q8IYH5 903 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 BBS10Q8TAM1 723 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 FAM222BQ8WU58 562 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 CNOT9Q92600 299 aaKnown RBP12.8□□□□□ -0.36
BRCA1-218ENST00000489037 STARD4Q96DR4 205 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 OR5B2Q96R09 309 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 A4GALTQ9NPC4 353 aa12.8□□□□□ -0.36
BRCA1-218ENST00000489037 CFAP73A6NFT4 308 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 CLDN24A6NM45 220 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 THBS1P07996 1170 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 CD8BP10966 210 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 BMP2P12643 396 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 SHC1P29353 583 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 RAC3P60763 192 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 CSNK2A1P68400 391 aaPredicted RBP12.79□□□□□ -0.36
BRCA1-218ENST00000489037 GUCY1A3Q02108 690 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 SNTB1Q13884 538 aaKnown RBP12.79□□□□□ -0.36
BRCA1-218ENST00000489037 TMEM201Q5SNT2 666 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 ZNF550Q7Z398 422 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 BTLAQ7Z6A9 289 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 DHDDSQ86SQ9 333 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 STK32CQ86UX6 486 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms