RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 MAELQ96JY0 434 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 TEX37Q96LM6 180 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 THUMPD3Q9BV44 507 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 KLHL4Q9C0H6 718 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 SAP130Q9H0E3 1048 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 SERINC1Q9NRX5 453 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 KCNE5Q9UJ90 142 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 SPIN1Q9Y657 262 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 PRRC2AP48634 2157 aaKnown RBP12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 AKAP6Q13023 2319 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 HMGN4O00479 90 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 DNAJA2O60884 412 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 ATE1O95260 518 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 KRT75O95678 551 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 MAGEA8P43361 318 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 RAC3P60763 192 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 FUT5Q11128 374 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 GNA13Q14344 377 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 TIGD2Q4W5G0 525 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 FRRS1Q6ZNA5 592 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 ZNF621Q6ZSS3 439 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 RNF130Q86XS8 419 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 ATP6V1C2Q8NEY4 427 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 SLC25A43Q8WUT9 341 aaPredicted RBP12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 ROBO4Q8WZ75 1007 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 TRNT1Q96Q11 434 aaKnown RBP12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 SRXN1Q9BYN0 137 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 OR10A4Q9H209 315 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 COQ10BQ9H8M1 238 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 EXOSC3Q9NQT5 275 aaKnown RBP12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 ZIM2Q9NZV7 527 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 C6orf203Q9P0P8 240 aaPredicted RBP12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 KLHL9Q9P2J3 617 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 KLHL13Q9P2N7 655 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 ABCA4P78363 2273 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 HIVEP1P15822 2718 aa12.33□□□□□ -0.44
SPTLC1-207ENST00000488921 CENPVL1A0A0U1RR11 272 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 DEFB108AA8MXU0 73 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 RFXANKO14593 260 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 EFNA2O43921 213 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 SLC22A3O75751 556 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 PRKD3O94806 890 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 H6PDO95479 791 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 NID1P14543 1247 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 FKBP2P26885 142 aaKnown RBP12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 IL12AP29459 219 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 PGM1P36871 562 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 SESN3P58005 492 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 CSNK2A1P68400 391 aaPredicted RBP12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 MERTKQ12866 999 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 MAPK14Q16539 360 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 DEFB113Q30KQ7 82 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 MSANTD1Q6ZTZ1 278 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 OLIG3Q7RTU3 272 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 ZNF550Q7Z398 422 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 CMIPQ8IY22 773 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 ZNF563Q8TA94 476 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 ABHD3Q8WU67 409 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 PMM1Q92871 262 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 PIK3IP1Q96FE7 263 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 C12orf49Q9H741 205 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 RMND5AQ9H871 391 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 ACER3Q9NUN7 267 aa12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 TEP1Q99973 2627 aaKnown RBP12.32□□□□□ -0.44
SPTLC1-207ENST00000488921 RAI1Q7Z5J4 1906 aaPredicted RBP12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 C9JVG2 144 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 UBDO15205 165 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 ANP32DO95626 131 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 UQCRBP14927 111 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 PSMB1P20618 241 aaKnown RBP12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 ENPP1P22413 925 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 APOBEC1P41238 236 aaKnown RBP12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 CDKN2CP42773 168 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 RIPPLY3P57055 190 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 KCNJ10P78508 379 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 CHRNEQ04844 493 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 SLC9B1Q4ZJI4 515 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 SYT14P1Q58G82 188 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 STAC2Q6ZMT1 411 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 LRRC74BQ6ZQY2 392 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 PLEKHM3Q6ZWE6 761 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 GRINAQ7Z429 371 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 TGIF2LYQ8IUE0 185 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 LRRC8CQ8TDW0 803 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 WDR60Q8WVS4 1066 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 ZNF75CPQ92670 426 aaPredicted RBP12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 ZC3HAV1LQ96H79 300 aaKnown RBP12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 OR5B2Q96R09 309 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 INPP5KQ9BT40 448 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 SLC38A1Q9H2H9 487 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 BCO1Q9HAY6 547 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 SDR39U1Q9NRG7 319 aaPredicted RBP12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 BEX4Q9NWD9 120 aaPredicted RBP12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 CALML5Q9NZT1 146 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 P2RX2Q9UBL9 471 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 GPR52Q9Y2T5 361 aa12.31□□□□□ -0.44
SPTLC1-207ENST00000488921 ZNF469Q96JG9 3925 aaPredicted RBP12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 A0A1W2PNR3 127 aa12.3□□□□□ -0.44
SPTLC1-207ENST00000488921 POLR3GO15318 223 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms