RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 DNAJB12Q9NXW2 375 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-209ENST00000488627 CRIM1Q9NZV1 1036 aa14.28□□□□□ -0.12
CTDSP1-209ENST00000488627 P2RX2Q9UBL9 471 aa14.28□□□□□ -0.12
CTDSP1-209ENST00000488627 CHST2Q9Y4C5 530 aa14.28□□□□□ -0.12
CTDSP1-209ENST00000488627 UQCRHLA0A096LP55 91 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 A0A0G2JND7 137 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 BCHEP06276 602 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 DBIP07108 87 aaKnown RBP14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 FCGR2AP12318 317 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 RYKP34925 604 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 PEX19P40855 299 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 KIR2DL3P43628 341 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 SORDQ00796 357 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 GUCY1A3Q02108 690 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 SELENBP1Q13228 472 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 RPS26P11Q5JNZ5 115 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 PDSS1Q5T2R2 415 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 PLEKHM3Q6ZWE6 761 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 ARFGAP2Q8N6H7 521 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 CNEP1R1Q8N9A8 125 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 ATP6V1C2Q8NEY4 427 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 TMEM234Q8WY98 164 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 MAL2Q969L2 176 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 LRRC46Q96FV0 321 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 TMEM19Q96HH6 336 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 RSPO3Q9BXY4 272 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 IKZF5Q9H5V7 419 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 A4GALTQ9NPC4 353 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 FGFR1OP2Q9NVK5 253 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 RLIMQ9NVW2 624 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 THUMPD1Q9NXG2 353 aaKnown RBP14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 GALNT8Q9NY28 637 aa14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 MCTS1Q9ULC4 181 aaKnown RBP14.27□□□□□ -0.13
CTDSP1-209ENST00000488627 CSMD1Q96PZ7 3565 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 MED12LQ86YW9 2145 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 FAM221AA4D161 298 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 GJE1A6NN92 205 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 AP3D1O14617 1153 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 SS18L1O75177 396 aaPredicted RBP14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 IL7RP16871 459 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 PCYT1AP49585 367 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 CRISP3P54108 245 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 SIRPAP78324 504 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 MERTKQ12866 999 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 FADDQ13158 208 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 MYBPHQ13203 477 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 ZNF239Q16600 458 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 MRPL2Q5T653 305 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 FAM214BQ7L5A3 538 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 RETREG3Q86VR2 466 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 VRK2Q86Y07 508 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 ADGRG3Q86Y34 549 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 KIF18BQ86Y91 864 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 PEX5LQ8IYB4 626 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 OR52P1PQ8NH57 321 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 WDR60Q8WVS4 1066 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 ROBO4Q8WZ75 1007 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 GMPPAQ96IJ6 420 aaPredicted RBP14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 ZNF559Q9BR84 538 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 TMEM120AQ9BXJ8 343 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 PRRG4Q9BZD6 226 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 OPN3Q9H1Y3 402 aaPredicted RBP14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 CCDC134Q9H6E4 229 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 BCL2L10Q9HD36 194 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 MED4Q9NPJ6 270 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 CALML5Q9NZT1 146 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 CLEC4AQ9UMR7 237 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 TRIM33Q9UPN9 1127 aa14.26□□□□□ -0.13
CTDSP1-209ENST00000488627 A0A0G2JPF8 293 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 A0A1W2PNR3 127 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 CDHR4A6H8M9 788 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 HNRNPCL2B2RXH8 293 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 HNRNPCL3B7ZW38 293 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 FAAHO00519 579 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 ATP8B1O43520 1251 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 HNRNPCL1O60812 293 aaKnown RBP14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 SMNDC1O75940 238 aaKnown RBP eCLIP14.25□□□□□ -0.133e-7■■■■■ 27.2
CTDSP1-209ENST00000488627 SYNGR4O95473 234 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 HNRNPCL4P0DMR1 293 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 CD8BP10966 210 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 GPX2P18283 190 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 APOBEC1P41238 236 aaKnown RBP14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 ACAA2P42765 397 aaKnown RBP14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 IDH2P48735 452 aaKnown RBP14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 RAC3P60763 192 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 FAM27E3Q08E93 113 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 PRAMEF8Q5VWM4 474 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 PRAMEF7Q5VXH5 474 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 C3orf33Q6P1S2 294 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 ZZZ3Q8IYH5 903 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 CLIP4Q8N3C7 705 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 DPP10Q8N608 796 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 ZNF610Q8N9Z0 462 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 LINC01560Q8TB33 94 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 RNF128Q8TEB7 428 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 FAM222BQ8WU58 562 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 TSPEARQ8WU66 669 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 CPNE4Q96A23 557 aaPredicted RBP14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 RAD21L1Q9H4I0 556 aa14.25□□□□□ -0.13
CTDSP1-209ENST00000488627 CTPS2Q9NRF8 586 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms