RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 PRKCAP17252 672 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 TCN1P20061 433 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-219ENST00000488186 CA7P43166 264 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 HTR3AP46098 478 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 B3GALT5-AS1P59052 145 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 BCL2A1Q16548 175 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 PDSS1Q5T2R2 415 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 C3P1Q6ZMU1 363 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 RINLQ6ZS11 566 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 FJX1Q86VR8 437 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 DOLPP1Q86YN1 238 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 CHERPQ8IWX8 916 aaKnown RBP14.22□□□□□ -0.13
C9orf3-219ENST00000488186 LZICQ8WZA0 190 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 SLC35B4Q969S0 331 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 WDYHV1Q96HA8 205 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 KLHDC3Q9BQ90 382 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 ADPRHL2Q9NX46 363 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 SELENONQ9NZV5 590 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 GMPR2Q9P2T1 348 aaKnown RBP14.22□□□□□ -0.13
C9orf3-219ENST00000488186 PRDM4Q9UKN5 801 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 PACSIN3Q9UKS6 424 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 BAG5Q9UL15 447 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 SPIN1Q9Y657 262 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-219ENST00000488186 GYG2O15488 501 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 FRS3O43559 492 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 GCM2O75603 506 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-219ENST00000488186 OPN1LWP04000 364 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 C8BP07358 591 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 CPN1P15169 458 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 ACVR2AP27037 513 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 ELK4P28324 431 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 HTR1EP28566 365 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 PTGER4P35408 488 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 APOBEC1P41238 236 aaKnown RBP14.21□□□□□ -0.13
C9orf3-219ENST00000488186 SLC1A3P43003 542 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 KCNJ5P48544 419 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 LHX2P50458 406 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 PER3P56645 1201 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 RGS8P57771 180 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-219ENST00000488186 RPS3AP61247 264 aaKnown RBP14.21□□□□□ -0.13
C9orf3-219ENST00000488186 RAC1P63000 192 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 DUSP7Q16829 419 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 SPATS1Q496A3 300 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 GLIPR1L2Q4G1C9 344 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 C4orf17Q53FE4 359 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 GLYATQ6IB77 296 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 WBP2NLQ6ICG8 309 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 TMEM211Q6ICI0 200 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 MTFR2Q6P444 385 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 GRINAQ7Z429 371 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 RANBP3LQ86VV4 465 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-219ENST00000488186 ULK2Q8IYT8 1036 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 LILRA2Q8N149 483 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 FAM26EQ8N5C1 309 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 RNF217Q8TC41 542 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 POC1BQ8TC44 478 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 TAMM41Q96BW9 452 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 TPD52L3Q96J77 140 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 TMEM185BQ9H7F4 350 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 TMEM27Q9HBJ8 222 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 EGFL7Q9UHF1 273 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 SLC5A6Q9Y289 635 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 SLC9A8Q9Y2E8 581 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 MYO7BQ6PIF6 2116 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 DOPEY1Q5JWR5 2465 aa14.21□□□□□ -0.13
C9orf3-219ENST00000488186 SYT5O00445 386 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 FAAHO00519 579 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 EIF1AYO14602 144 aaKnown RBP14.2□□□□□ -0.14
C9orf3-219ENST00000488186 ATP5HO75947 161 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 ZNF682O95780 498 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 LGI1O95970 557 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 FESP07332 822 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 PRG2P13727 222 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 CCNA2P20248 432 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 CXCR1P25024 350 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 SFTPDP35247 375 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 CPOXP36551 454 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 ACAA2P42765 397 aaKnown RBP14.2□□□□□ -0.14
C9orf3-219ENST00000488186 RASSF2P50749 326 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 POLR2HP52434 150 aaKnown RBP14.2□□□□□ -0.14
C9orf3-219ENST00000488186 HOXC5Q00444 222 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 SGCBQ16585 318 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 TMEM44Q2T9K0 475 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 CYBRD1Q53TN4 286 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 SLC25A53Q5H9E4 307 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 DCST1Q5T197 706 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 PPP4R4Q6NUP7 873 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 PLEKHM3Q6ZWE6 761 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 ARHGAP24Q8N264 748 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 OR52E4Q8NGH9 312 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 VANGL1Q8TAA9 524 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-219ENST00000488186 RELTQ969Z4 430 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 TRIB1Q96RU8 372 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 NPAS1Q99742 590 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 ZNF559Q9BR84 538 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 TRIM2Q9C040 744 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 PRDM14Q9GZV8 571 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 C1orf21Q9H246 121 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 SH3GLB1Q9Y371 365 aa14.2□□□□□ -0.14
C9orf3-219ENST00000488186 CHST2Q9Y4C5 530 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms