RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 ZNF563Q8TA94 476 aa12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 OSTF1Q92882 214 aa12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 TMEM19Q96HH6 336 aa12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 PIGMQ9H3S5 423 aa12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 CCDC134Q9H6E4 229 aa12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 SLC24A3Q9HC58 644 aa12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 TIGARQ9NQ88 270 aa12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 EXOSC3Q9NQT5 275 aaKnown RBP12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 VAPAQ9P0L0 249 aa12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 LEF1Q9UJU2 399 aaPredicted RBP12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 FOXD3Q9UJU5 478 aaPredicted RBP12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 MCTS1Q9ULC4 181 aaKnown RBP12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 NDUFAF1Q9Y375 327 aa12.71□□□□□ -0.37
PFKFB3-213ENST00000487989 HCFC1P51610 2035 aa12.71□□□□□ -0.38
PFKFB3-213ENST00000487989 ABCA12Q86UK0 2595 aa12.71□□□□□ -0.38
PFKFB3-213ENST00000487989 DSPPQ9NZW4 1301 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 TRBV5-3A0A0A0MS03 114 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 A0A0G2JPF8 293 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 HNRNPCL2B2RXH8 293 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 HNRNPCL3B7ZW38 293 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 ANGPT2O15123 496 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 HNRNPCL1O60812 293 aaKnown RBP12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 HNRNPCL4P0DMR1 293 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 SSTR2P30874 369 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 MDH1P40925 334 aaKnown RBP12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 SIRPAP78324 504 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 PLAURQ03405 335 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 MERTKQ12866 999 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 SELENBP1Q13228 472 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 MRPL2Q5T653 305 aaKnown RBP12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 CGB2Q6NT52 195 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 VRK2Q86Y07 508 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 MAL2Q969L2 176 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 RBM24Q9BX46 236 aaKnown RBP12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 CACYBPQ9HB71 228 aaKnown RBP12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 A4GALTQ9NPC4 353 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 SERINC1Q9NRX5 453 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 ACER3Q9NUN7 267 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 DNAJB12Q9NXW2 375 aaKnown RBP12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 PACSIN3Q9UKS6 424 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 ZNF232Q9UNY5 417 aa12.7□□□□□ -0.38
PFKFB3-213ENST00000487989 EVPLLA8MZ36 301 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 C5orf58C9J3I9 102 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 ADAM11O75078 769 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 SMNDC1O75940 238 aaKnown RBP eCLIP12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 PLGP00747 810 aaPredicted RBP12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 BMP2P12643 396 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 SLC7A1P30825 629 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 PEX19P40855 299 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 KIR2DL2P43627 348 aaPredicted RBP12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 KIR2DL3P43628 341 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 CPA2P48052 419 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 IDH2P48735 452 aaKnown RBP12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 MYBPHQ13203 477 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 LARS2Q15031 903 aaKnown RBP12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 LIN52Q52LA3 116 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 C3orf33Q6P1S2 294 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 VWA1Q6PCB0 445 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 DLEU7Q6UYE1 221 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 PLEKHM3Q6ZWE6 761 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 BTLAQ7Z6A9 289 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 KIF18BQ86Y91 864 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 TSPEARQ8WU66 669 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 STARD4Q96DR4 205 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 C14orf79Q96F83 325 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 REXO5Q96IC2 774 aaKnown RBP12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 DOCK7Q96N67 2140 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 RLIMQ9NVW2 624 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 KCNN3Q9UGI6 736 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 CORO2BQ9UQ03 480 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 GMEB1Q9Y692 573 aa12.69□□□□□ -0.38
PFKFB3-213ENST00000487989 PKDREJQ9NTG1 2253 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 A0A1W2PNR3 127 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 CDHR4A6H8M9 788 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 CFAP73A6NFT4 308 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 A8MXE2 369 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 AP3D1O14617 1153 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 MSTNO14793 375 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 THBS1P07996 1170 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 GPX2P18283 190 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 APOBEC1P41238 236 aaKnown RBP12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 TLE4Q04727 773 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 RUNDC3AQ59EK9 446 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 GCNT6Q5T4J0 391 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 PRAMEF8Q5VWM4 474 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 PRAMEF7Q5VXH5 474 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 GTF2IRD2BQ6EKJ0 949 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 ZNF836Q6ZNA1 936 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 FAM214BQ7L5A3 538 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 GRINAQ7Z429 371 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 DHDDSQ86SQ9 333 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 GTF2IRD2Q86UP8 949 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 RETREG3Q86VR2 466 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 ZNF440Q8IYI8 595 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 C10orf111Q8N326 155 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 DPP10Q8N608 796 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 NFKBIDQ8NI38 313 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 BBS10Q8TAM1 723 aa12.68□□□□□ -0.38
PFKFB3-213ENST00000487989 ROBO4Q8WZ75 1007 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms