RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 EID3Q8N140 333 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 LSMEM1Q8N8F7 131 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 OR5M1Q8NGP8 315 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 FAM57AQ8TBR7 257 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 PROX1Q92786 737 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 NPAS1Q99742 590 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 WFDC6Q9BQY6 131 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 PRDM14Q9GZV8 571 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 PCDHAC1Q9H158 963 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 DCAF13Q9NV06 445 aaKnown RBP17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 ACTR3BQ9P1U1 418 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 STOML1Q9UBI4 398 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 TESQ9UGI8 421 aaKnown RBP17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 RPS6KA6Q9UK32 745 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 AP4B1Q9Y6B7 739 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 ZGRF1Q86YA3 2104 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 SVILO95425 2214 aa17.51■□□□□ 0.39
PCOLCE-208ENST00000487172 SHISA8B8ZZ34 492 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 NPIPA2E9PIF3 369 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 NPIPA3F8WFD2 350 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 ARPC2O15144 300 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 FMO6PO60774 539 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 SLC19A2O60779 497 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 SERPINA1P01009 418 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 ABOP16442 354 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 TCEA1P23193 301 aaKnown RBP17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 APOBEC1P41238 236 aaKnown RBP17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 LHX2P50458 406 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 RAC1P63000 192 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 GABPB1Q06547 395 aaPredicted RBP17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 WLSQ5T9L3 541 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 PLEKHM3Q6ZWE6 761 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 PM20D2Q8IYS1 436 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 WDYHV1Q96HA8 205 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 ZNF559Q9BR84 538 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 CADM1Q9BY67 442 aaKnown RBP17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 TRIM2Q9C040 744 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 MMADHCQ9H3L0 296 aaPredicted RBP17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 SAMD4AQ9UPU9 718 aaKnown RBP17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 SLC9A8Q9Y2E8 581 aa17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 SMG1Q96Q15 3661 aaKnown RBP17.5■□□□□ 0.39
PCOLCE-208ENST00000487172 EFNA2O43921 213 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 TPST2O60704 377 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 ZNF708P17019 499 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 MAP2K6P52564 334 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 CLDN18P56856 261 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 NCALDP61601 193 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 MRPL49Q13405 166 aaKnown RBP17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 GXYLT1Q4G148 440 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 RANBP3LQ86VV4 465 aaPredicted RBP17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 OR4D11Q8NGI4 311 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 OR6T1Q8NGN1 323 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 CLPTM1LQ96KA5 538 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 NSMCE2Q96MF7 247 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 LRMDAQ9H2I8 198 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 ACAD8Q9UKU7 415 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 SH3GLB1Q9Y371 365 aa17.49■□□□□ 0.39
PCOLCE-208ENST00000487172 M0R3H8 397 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 PRRG2O14669 202 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 ZNHIT1O43257 154 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 PDE5AO76074 875 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 WISP1O95388 367 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 STSP08842 583 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 FKBP2P26885 142 aaKnown RBP17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 STARP49675 285 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 MS4A2Q01362 244 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 MERTKQ12866 999 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 TRAP1Q12931 704 aaKnown RBP17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 SELENBP1Q13228 472 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 NPTX1Q15818 432 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 MTX3Q5HYI7 312 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 EMC4Q5J8M3 183 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 DCST1Q5T197 706 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 LCN8Q6JVE9 175 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 CARM1Q86X55 608 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 ADGRG3Q86Y34 549 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 LACC1Q8IV20 430 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 ASB9Q96DX5 294 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 TPD52L3Q96J77 140 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 MCHR1Q99705 422 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 C12orf10Q9HB07 376 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 TMEM27Q9HBJ8 222 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 SERINC1Q9NRX5 453 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 TNFRSF10DQ9UBN6 386 aa17.48■□□□□ 0.39
PCOLCE-208ENST00000487172 AHRRA9YTQ3 701 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 H3BML4 177 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 WDR1O75083 606 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 ZNF682O95780 498 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 TPOP07202 933 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 HOXD4P09016 255 aaPredicted RBP17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 POU3F2P20265 443 aaPredicted RBP17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 GNLYP22749 145 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 HTR2AP28223 471 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 TACR3P29371 465 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 POLR2HP52434 150 aaKnown RBP17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 HOXC5Q00444 222 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 OR1Q1Q15612 314 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 IFI44LQ53G44 452 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 DHFR2Q86XF0 187 aa17.47■□□□□ 0.39
PCOLCE-208ENST00000487172 DOLPP1Q86YN1 238 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms