RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ZNF540Q8NDQ6 660 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 PRSS33Q8NF86 280 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 OR52L1Q8NGH7 329 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 OR8J1Q8NGP2 316 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 M1APQ8TC57 530 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 TTC9Q92623 222 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 MYDGFQ969H8 173 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 PMEPA1Q969W9 287 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 C8orf44Q96CB5 159 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 SLC38A2Q96QD8 506 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 NODALQ96S42 347 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 TUBA1CQ9BQE3 449 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 POLDIP3Q9BY77 421 aaKnown RBP6.46□□□□□ -1.38
SF3A3-206ENST00000487062 B3GNT4Q9C0J1 378 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 C12orf10Q9HB07 376 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 ZBTB20Q9HC78 741 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-206ENST00000487062 PARD6AQ9NPB6 346 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 TBC1D23Q9NUY8 699 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 FLRT3Q9NZU0 649 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 CNIH4Q9P003 139 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 FOXD3Q9UJU5 478 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF223Q9UK11 482 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-206ENST00000487062 CARD8Q9Y2G2 431 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 CDH10Q9Y6N8 788 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 HEATR5AQ86XA9 2040 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 A0A087WUJ7 227 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 IGHV1-45A0A0A0MS14 117 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 NSG1A0A0A6YYJ2 146 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 EFCAB10A6NFE3 127 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 CCDC160A6NGH7 325 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 ELOA3DA6NLF2 546 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-206ENST00000487062 SNTNA6NMZ2 147 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 EFCAB9A8MZ26 197 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 WWP2O00308 870 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 TP53I11O14683 189 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 KLF4O43474 513 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 HCRTR2O43614 444 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 RGS10O43665 173 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 SCO2O43819 266 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 XPNPEP2O43895 674 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 FADS1O60427 444 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 HCN1O60741 890 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 WBP4O75554 376 aaKnown RBP6.45□□□□□ -1.38
SF3A3-206ENST00000487062 KLF7O75840 302 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-206ENST00000487062 NUDT14O95848 222 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 TP53P04637 393 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-206ENST00000487062 HMGN1P05114 100 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 UMODP07911 640 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 SAGP10523 405 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-206ENST00000487062 GP1BBP13224 206 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 ICAM2P13598 275 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 JUNBP17275 347 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-206ENST00000487062 GABRB1P18505 474 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 ITPKBP27987 946 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 EVI2BP34910 448 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 GPR4P46093 362 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 SLC9A3P48764 834 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 P2RX1P51575 399 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 MVKQ03426 396 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 C17orf67Q0P5P2 114 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 CBFBQ13951 182 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 SSPNQ14714 243 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 CD226Q15762 336 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 SNAPC1Q16533 368 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 TMEM44Q2T9K0 475 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 NDUFAF6Q330K2 333 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 ELOA3BQ3SY89 546 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 C3orf38Q5JPI3 329 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 MEDAGQ5VYS4 303 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 PLAG1Q6DJT9 500 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 LAIR2Q6ISS4 152 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 BORAQ6PGQ7 559 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 KIRREL2Q6UWL6 708 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 LINC00114Q6XXX2 140 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF620Q6ZNG0 422 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 KCTD8Q6ZWB6 473 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 NDUFAF7Q7L592 441 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 PRSS48Q7RTY5 328 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 GPR141Q7Z602 305 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 MARCH3Q86UD3 253 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 SATL1Q86VE3 508 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 CCDC71Q8IV32 467 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-206ENST00000487062 NLGN4XQ8N0W4 816 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 CACTIN-AS1Q8N1I8 211 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 ELOA3Q8NG57 546 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 B4GALNT2Q8NHY0 566 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF563Q8TA94 476 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 ELP5Q8TE02 316 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 THAP3Q8WTV1 239 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-206ENST00000487062 CT55Q8WUE5 264 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 APH1BQ8WW43 257 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 NACC2Q96BF6 587 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 BPIFA2Q96DR5 249 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 SGTBQ96EQ0 304 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 PLEKHA8Q96JA3 519 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 GPA33Q99795 319 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 LRFN3Q9BTN0 628 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 ZNF426Q9BUY5 554 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 TSSK6Q9BXA6 273 aa6.45□□□□□ -1.38
SF3A3-206ENST00000487062 DPH1Q9BZG8 443 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms