RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TRIM64A6NGJ6 449 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 TRIM64BA6NI03 449 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 ETV2O00321 342 aaPredicted RBP21.81■■□□□ 1.08
LIME1-206ENST00000487026 ANKRD28O15084 1053 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 LY6G6DO95868 133 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 AK1P00568 194 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 C1QCP02747 245 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 UQCRC2P22695 453 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 NR1H2P55055 460 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 NME5P56597 212 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 SESN3P58005 492 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 RAC3P60763 192 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 SFRP5Q5T4F7 317 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 HEPHL1Q6MZM0 1159 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 RAB3IL1Q8TBN0 382 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 ZG16BQ96DA0 208 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 HDHD5Q9BXW7 423 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 OR10A4Q9H209 315 aa21.81■■□□□ 1.08
LIME1-206ENST00000487026 SSU72Q9NP77 194 aaKnown RBP21.81■■□□□ 1.08
LIME1-206ENST00000487026 ING1Q9UK53 422 aaPredicted RBP21.81■■□□□ 1.08
LIME1-206ENST00000487026 ZNF814B7Z6K7 855 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 TM9SF1O15321 606 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 BCAS1O75363 584 aaPredicted RBP21.8■■□□□ 1.08
LIME1-206ENST00000487026 IL32P24001 234 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 PTH2RP49190 550 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 MERTKQ12866 999 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 STX3Q13277 289 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 SPANXN4Q5MJ08 99 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 ANXA8L1Q5VT79 327 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 TYW3Q6IPR3 259 aaKnown RBP21.8■■□□□ 1.08
LIME1-206ENST00000487026 PRSS57Q6UWY2 283 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 EIF3MQ7L2H7 374 aaKnown RBP21.8■■□□□ 1.08
LIME1-206ENST00000487026 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.8■■□□□ 1.08
LIME1-206ENST00000487026 SLC43A2Q8N370 569 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 MIPOL1Q8TD10 442 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 IGFBPL1Q8WX77 278 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 COX4I2Q96KJ9 171 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 PAIP2Q9BPZ3 127 aaKnown RBP21.8■■□□□ 1.08
LIME1-206ENST00000487026 PSD2Q9BQI7 771 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 TACO1Q9BSH4 297 aaKnown RBP21.8■■□□□ 1.08
LIME1-206ENST00000487026 TMEM204Q9BSN7 226 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 GP6Q9HCN6 339 aa21.8■■□□□ 1.08
LIME1-206ENST00000487026 SMAD9O15198 467 aaKnown RBP21.79■■□□□ 1.08
LIME1-206ENST00000487026 DNAJA2O60884 412 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 LBPP18428 481 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 EDNRAP25101 427 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 RASGEF1BQ0VAM2 473 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 CASP8Q14790 479 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 TAB1Q15750 504 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 CEP85LQ5SZL2 805 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 C3orf33Q6P1S2 294 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 LSRQ86X29 649 aaPredicted RBP21.79■■□□□ 1.08
LIME1-206ENST00000487026 VPS37AQ8NEZ2 397 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 TMEM171Q8WVE6 324 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 ST8SIA1Q92185 356 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 AKAP1Q92667 903 aaKnown RBP eCLIP21.79■■□□□ 1.08
LIME1-206ENST00000487026 TESCQ96BS2 214 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 ROPN1LQ96C74 230 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 ZNF300Q96RE9 604 aaPredicted RBP21.79■■□□□ 1.08
LIME1-206ENST00000487026 GSX2Q9BZM3 304 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 PRSS50Q9UI38 385 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 WDR45Q9Y484 360 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 NSD1Q96L73 2696 aaPredicted RBP21.79■■□□□ 1.08
LIME1-206ENST00000487026 USF3Q68DE3 2245 aa21.79■■□□□ 1.08
LIME1-206ENST00000487026 HS3ST1O14792 307 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 FUT5Q11128 374 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 CAPRIN1Q14444 709 aaKnown RBP21.78■■□□□ 1.08
LIME1-206ENST00000487026 ATAD3BQ5T9A4 648 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 SAXO2Q658L1 398 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 ATG4DQ86TL0 474 aaPredicted RBP21.78■■□□□ 1.08
LIME1-206ENST00000487026 LILRB1Q8NHL6 650 aaPredicted RBP21.78■■□□□ 1.08
LIME1-206ENST00000487026 KISS1RQ969F8 398 aaPredicted RBP21.78■■□□□ 1.08
LIME1-206ENST00000487026 ARL8AQ96BM9 186 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 DNAJA3Q96EY1 480 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 TEX37Q96LM6 180 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 BDH2Q9BUT1 245 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 BCO1Q9HAY6 547 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 SERINC1Q9NRX5 453 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 ACER3Q9NUN7 267 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 KLHL9Q9P2J3 617 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 HAO1Q9UJM8 370 aa21.78■■□□□ 1.08
LIME1-206ENST00000487026 PRAMEF27A3QJZ7 478 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 CLOCKO15516 846 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 KIAA0513O60268 411 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 CYTIPO60759 359 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 HEXAP06865 529 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 PGCP20142 388 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 RYKP34925 604 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 CHI3L1P36222 383 aaPredicted RBP21.77■■□□□ 1.08
LIME1-206ENST00000487026 PGM1P36871 562 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 DIO1P49895 249 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 BST1Q10588 318 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 FAM174BQ3ZCQ3 159 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 TNFAIP8L3Q5GJ75 292 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 FRRS1Q6ZNA5 592 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 ZNF611Q8N823 705 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 TMEM234Q8WY98 164 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 ZNF75CPQ92670 426 aaPredicted RBP21.77■■□□□ 1.08
LIME1-206ENST00000487026 NEURL3Q96EH8 262 aa21.77■■□□□ 1.08
LIME1-206ENST00000487026 SLC35A5Q9BS91 424 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms