RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 NKIRAS1Q9NYS0 192 aa12.87□□□□□ -0.35
CLDN11-207ENST00000486975 MARCOQ9UEW3 520 aaPredicted RBP12.87□□□□□ -0.35
CLDN11-207ENST00000486975 MKLN1Q9UL63 735 aa12.87□□□□□ -0.35
CLDN11-207ENST00000486975 CLEC4AQ9UMR7 237 aa12.87□□□□□ -0.35
CLDN11-207ENST00000486975 SLC35A3Q9Y2D2 325 aa12.87□□□□□ -0.35
CLDN11-207ENST00000486975 WDR45Q9Y484 360 aa12.87□□□□□ -0.35
CLDN11-207ENST00000486975 CENPVL1A0A0U1RR11 272 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 KLF11O14901 512 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 CSTAP01040 98 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 PGRP06401 933 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 IDO1P14902 403 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 MAGEA8P43361 318 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 RNF144AP50876 292 aaPredicted RBP12.86□□□□□ -0.35
CLDN11-207ENST00000486975 RAC3P60763 192 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 FUT5Q11128 374 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 POU4F3Q15319 338 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 DEFB113Q30KQ7 82 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 TMEM176BQ3YBM2 270 aaPredicted RBP12.86□□□□□ -0.35
CLDN11-207ENST00000486975 TYW3Q6IPR3 259 aaKnown RBP12.86□□□□□ -0.35
CLDN11-207ENST00000486975 C3orf33Q6P1S2 294 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 TNFAIP8L2Q6P589 184 aaPredicted RBP12.86□□□□□ -0.35
CLDN11-207ENST00000486975 FRRS1Q6ZNA5 592 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 BEND4Q6ZU67 534 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 STK32CQ86UX6 486 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 ZNF619Q8N2I2 560 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 SLC43A2Q8N370 569 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 TMCO5AQ8N6Q1 288 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 XAGE5Q8WWM1 108 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 TMEM234Q8WY98 164 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 RAB8BQ92930 207 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 ARL8AQ96BM9 186 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 ZBTB9Q96C00 473 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 ZNF524Q96C55 264 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 REXO5Q96IC2 774 aaKnown RBP12.86□□□□□ -0.35
CLDN11-207ENST00000486975 TACO1Q9BSH4 297 aaKnown RBP12.86□□□□□ -0.35
CLDN11-207ENST00000486975 SRXN1Q9BYN0 137 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 WDR55Q9H6Y2 383 aaPredicted RBP12.86□□□□□ -0.35
CLDN11-207ENST00000486975 MANSC1Q9H8J5 431 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 KLHL13Q9P2N7 655 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 LIPT1Q9Y234 373 aa12.86□□□□□ -0.35
CLDN11-207ENST00000486975 C2CD3Q4AC94 2353 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 UQCRHLA0A096LP55 91 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 CCDC154A6NI56 674 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 HMGN4O00479 90 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 CD53P19397 219 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 PGCP20142 388 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 PSMB1P20618 241 aaKnown RBP12.85□□□□□ -0.35
CLDN11-207ENST00000486975 IL12AP29459 219 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 CHI3L1P36222 383 aaPredicted RBP12.85□□□□□ -0.35
CLDN11-207ENST00000486975 PGM1P36871 562 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 ANXA11P50995 505 aaKnown RBP12.85□□□□□ -0.35
CLDN11-207ENST00000486975 CCR4P51679 360 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 MAPK14Q16539 360 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 TIGD2Q4W5G0 525 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 PDCD4Q53EL6 469 aaKnown RBP12.85□□□□□ -0.35
CLDN11-207ENST00000486975 STAC2Q6ZMT1 411 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 FCRLAQ7L513 359 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 RFWD2Q8NHY2 731 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 MGARPQ8TDB4 240 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 ABHD3Q8WU67 409 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 SLC25A43Q8WUT9 341 aaPredicted RBP12.85□□□□□ -0.35
CLDN11-207ENST00000486975 ROBO4Q8WZ75 1007 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 PMM1Q92871 262 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 TRNT1Q96Q11 434 aaKnown RBP12.85□□□□□ -0.35
CLDN11-207ENST00000486975 PANX1Q96RD7 426 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 ZBTB18Q99592 522 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 THUMPD3Q9BV44 507 aaKnown RBP12.85□□□□□ -0.35
CLDN11-207ENST00000486975 EXOSC3Q9NQT5 275 aaKnown RBP12.85□□□□□ -0.35
CLDN11-207ENST00000486975 ACER3Q9NUN7 267 aa12.85□□□□□ -0.35
CLDN11-207ENST00000486975 BEX4Q9NWD9 120 aaPredicted RBP12.85□□□□□ -0.35
CLDN11-207ENST00000486975 GOLGA8QA0A0J9YX86 632 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 PRAMEF27A3QJZ7 478 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 GOLGA8OA6NCC3 632 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 GOLGA8NF8WBI6 632 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 PRKD3O94806 890 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 IL6P05231 212 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 UBTFL6P0CB48 400 aaPredicted RBP12.84□□□□□ -0.35
CLDN11-207ENST00000486975 LOXP28300 417 aaPredicted RBP12.84□□□□□ -0.35
CLDN11-207ENST00000486975 SLC7A1P30825 629 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 CASP9P55211 416 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 SESN3P58005 492 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 HPCAP84074 193 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 GSTA3Q16772 222 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 EXOC3L2Q2M3D2 409 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 TMEM201Q5SNT2 666 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 OLIG3Q7RTU3 272 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 ZNF550Q7Z398 422 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 RNF130Q86XS8 419 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 CMIPQ8IY22 773 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 PIWIL2Q8TC59 973 aaKnown RBP12.84□□□□□ -0.35
CLDN11-207ENST00000486975 OR52E6Q96RD3 313 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 KLHL4Q9C0H6 718 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 BCO1Q9HAY6 547 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 SDR39U1Q9NRG7 319 aaPredicted RBP12.84□□□□□ -0.35
CLDN11-207ENST00000486975 SERINC1Q9NRX5 453 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 C6orf203Q9P0P8 240 aaPredicted RBP12.84□□□□□ -0.35
CLDN11-207ENST00000486975 GPR52Q9Y2T5 361 aa12.84□□□□□ -0.35
CLDN11-207ENST00000486975 H6PDO95479 791 aa12.83□□□□□ -0.36
CLDN11-207ENST00000486975 THBDP07204 575 aa12.83□□□□□ -0.36
CLDN11-207ENST00000486975 YES1P07947 543 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms