RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SENP5Q96HI0 755 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 FRMD6Q96NE9 622 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 DEFB126Q9BYW3 111 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 IRF2BPLQ9H1B7 796 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 HS3ST3A1Q9Y663 406 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 A0A1W2PQ72 361 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 BCAT2O15382 392 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 PRKAR1BP31321 381 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 GZMMP51124 257 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 ARFIP1P53367 373 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 AGERQ15109 404 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 ALG10Q5BKT4 473 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 RNF165Q6ZSG1 346 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 RASSF6Q6ZTQ3 369 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 LSRQ86X29 649 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 WDR34Q96EX3 536 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 OR2A14Q96R47 310 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 FBXO34Q9NWN3 711 aa12.28□□□□□ -0.44
HMGN1-216ENST00000486741 WSB2Q9NYS7 404 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 CNOT1A5YKK6 2376 aaKnown RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 EP300Q09472 2414 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-216ENST00000486741 A0A1W2PPV9 198 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 ZNF879B4DU55 563 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 HPGDSO60760 199 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 MAS1P04201 325 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 RPS19P39019 145 aaKnown RBP12.27□□□□□ -0.44
HMGN1-216ENST00000486741 TBRG1Q3YBR2 411 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 ZCCHC12Q6PEW1 402 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 MED25Q71SY5 747 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 ZNF627Q7L945 461 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 NAXEQ8NCW5 288 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 SIMC1Q8NDZ2 872 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 TCTN2Q96GX1 697 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 ELF4Q99607 663 aaPredicted RBP12.27□□□□□ -0.44
HMGN1-216ENST00000486741 SLC25A18Q9H1K4 315 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 RXFP3Q9NSD7 469 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 SIRT3Q9NTG7 399 aaPredicted RBP12.27□□□□□ -0.44
HMGN1-216ENST00000486741 SLC22A7Q9Y694 548 aa12.27□□□□□ -0.44
HMGN1-216ENST00000486741 C9J4A7 227 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 GALR3O60755 368 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-216ENST00000486741 FMO6PO60774 539 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 UBL4AP11441 157 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF24P17028 368 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 MLLT11Q13015 90 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-216ENST00000486741 HTR4Q13639 388 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 PRSS53Q2L4Q9 553 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 VWA2Q5GFL6 755 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 HES5Q5TA89 166 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 OTPQ5XKR4 325 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 SERPINA12Q8IW75 414 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 RCBTB1Q8NDN9 531 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 ZFPM2Q8WW38 1151 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 NMNAT3Q96T66 252 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 BCL7BQ9BQE9 202 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF304Q9HCX3 659 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 SDHAF3Q9NRP4 125 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 TBCCD1Q9NVR7 557 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 RARRES3Q9UL19 164 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 SYT5O00445 386 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 GPX5O75715 221 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 AQP2P41181 271 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 RPS5P46782 204 aaKnown RBP12.27□□□□□ -0.45
HMGN1-216ENST00000486741 HCCSP53701 268 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 MEPCEQ7L2J0 689 aaKnown RBP12.27□□□□□ -0.45
HMGN1-216ENST00000486741 GPALPP1Q8IXQ4 340 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 KATNB1Q9BVA0 655 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 ABCG5Q9H222 651 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 CLEC4MQ9H2X3 399 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-216ENST00000486741 FGF21Q9NSA1 209 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 ALKBH4Q9NXW9 302 aa12.27□□□□□ -0.45
HMGN1-216ENST00000486741 RABL2AQ9UBK7 228 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-216ENST00000486741 C19orf53Q9UNZ5 99 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-216ENST00000486741 FAM25EA8MYX2 175 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 RGS9O75916 674 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-216ENST00000486741 SLC35E2P0CK97 266 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 STEAP3Q658P3 488 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 HINT3Q9NQE9 182 aaKnown RBP12.26□□□□□ -0.45
HMGN1-216ENST00000486741 TXNL4BQ9NX01 149 aaKnown RBP12.26□□□□□ -0.45
HMGN1-216ENST00000486741 MYEF2Q9P2K5 600 aaKnown RBP12.26□□□□□ -0.45
HMGN1-216ENST00000486741 A4GNTQ9UNA3 340 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 ING4Q9UNL4 249 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 LOC100509620A0A075B734 347 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 A0A1W2PQ09 198 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 ANKRD33BA6NCL7 494 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 PTGS2P35354 604 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 PCBP4P57723 403 aaKnown RBP12.26□□□□□ -0.45
HMGN1-216ENST00000486741 CTF1Q16619 201 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 TMEM225Q6GV28 225 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 TSSK4Q6SA08 328 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 TMPRSS12Q86WS5 348 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 SLC37A3Q8NCC5 494 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 HLA-CQ95604 372 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 LPAR4Q99677 370 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 BABAM2Q9NXR7 383 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 PGCP20142 388 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 TSFMP43897 325 aaKnown RBP12.26□□□□□ -0.45
HMGN1-216ENST00000486741 SLC6A9P48067 706 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 TAS2R43P59537 309 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 PPP3R1P63098 170 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 ABCA7Q8IZY2 2146 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms