RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ZFP36L2P47974 494 aaKnown RBP6.22□□□□□ -1.41
HDAC3-209ENST00000486618 TTPAP49638 278 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 SERPINB9P50453 376 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 HLCSP50747 726 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 EFNA3P52797 238 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 NUP107P57740 925 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 ERVFRD-1P60508 538 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 SRSF3P84103 164 aaKnown RBP6.22□□□□□ -1.41
HDAC3-209ENST00000486618 MEF2AQ02078 507 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-209ENST00000486618 PRDX1Q06830 199 aaKnown RBP6.22□□□□□ -1.41
HDAC3-209ENST00000486618 PMPCAQ10713 525 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 CDH17Q12864 832 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 NSDHLQ15738 373 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 CCSMST1Q4G0I0 132 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 SFT2D3Q587I9 215 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 AGBL2Q5U5Z8 902 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 CLVS1Q8IUQ0 354 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-209ENST00000486618 KLHL36Q8N4N3 616 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 AMER2Q8N7J2 671 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 PLPP5Q8NEB5 264 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 OR5M3Q8NGP4 307 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 OR10Q1Q8NGQ4 319 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 OR9A4Q8NGU2 314 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 C16orf52Q8NHV5 167 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 SELENOMQ8WWX9 145 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 DVL3Q92997 716 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-209ENST00000486618 FBXW5Q969U6 566 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 MCUR1Q96AQ8 359 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 HAVCR1Q96D42 359 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 MBD6Q96DN6 1003 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 C18orf12Q96KH6 178 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 FOXN4Q96NZ1 517 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 ZNF317Q96PQ6 595 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-209ENST00000486618 ZNF607Q96SK3 696 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 NPAS2Q99743 824 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 DHRS9Q9BPW9 319 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 OSBPL8Q9BZF1 889 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 DNTTIP1Q9H147 329 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 NHEJ1Q9H9Q4 299 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-209ENST00000486618 GP6Q9HCN6 339 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 PCYOX1Q9UHG3 505 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 DAPP1Q9UN19 280 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 WBP11Q9Y2W2 641 aaKnown RBP6.22□□□□□ -1.41
HDAC3-209ENST00000486618 LIPGQ9Y5X9 500 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 V9GYQ6 96 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 ARID1AO14497 2285 aa6.22□□□□□ -1.41
HDAC3-209ENST00000486618 FN1P02751 2386 aaKnown RBP6.21□□□□□ -1.42
HDAC3-209ENST00000486618 A0A0U1RQJ8 604 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 FUOMA2VDF0 154 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 TUBAL3A6NHL2 446 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 ERI2A8K979 691 aaKnown RBP6.21□□□□□ -1.42
HDAC3-209ENST00000486618 MAGEB17A8MXT2 336 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 FAM47E-STBD1D6RA91 191 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 PJA2O43164 708 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 KCNAB3O43448 404 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 SEC14L2O76054 403 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 TJP3O95049 919 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 MBP02144 154 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 GBAP04062 536 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 INHBBP09529 407 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 RPA2P15927 270 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 TNNI3P19429 210 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 HRH2P25021 359 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 LCN1P31025 176 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 MC5RP33032 325 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 BCL6P41182 706 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 KIR2DL3P43628 341 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 UCP2P55851 309 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 CORO7P57737 925 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 OR4D2P58180 307 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 MLF1P58340 268 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 YBX1P67809 324 aaKnown RBP6.21□□□□□ -1.42
HDAC3-209ENST00000486618 ABRAXAS2Q15018 415 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 SLC25A35Q3KQZ1 300 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 CMPK2Q5EBM0 449 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 Q5PR19 223 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 PHYHD1Q5SRE7 291 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 TSTD2Q5T7W7 516 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 Q71RC1 249 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF554Q86TJ5 538 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 RTN4RL2Q86UN3 420 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 ZDHHC21Q8IVQ6 265 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 UBE2J2Q8N2K1 259 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 UBL4BQ8N7F7 174 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 TMEM52Q8NDY8 209 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 OR7G1Q8NGA0 311 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 OR13J1Q8NGT2 312 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 SPATA3Q8NHX4 192 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF596Q8TC21 504 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 RFT1Q96AA3 541 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 PRRC1Q96M27 445 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 QRFPRQ96P65 431 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 OR51B5Q9H339 312 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 LIME1Q9H400 295 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 SAV1Q9H4B6 383 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-209ENST00000486618 AUNIPQ9H7T9 357 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 ZMAT4Q9H898 229 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 ANKHQ9HCJ1 492 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF275Q9NSD4 429 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-209ENST00000486618 CATSPERZQ9NTU4 200 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms