RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 AGTR1P30556 359 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 SLC7A1P30825 629 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 RAC3P60763 192 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 KCNJ10P78508 379 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 HPCAP84074 193 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 CHRNEQ04844 493 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 KEAP1Q14145 624 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 BEND4Q6ZU67 534 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 FCRLAQ7L513 359 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 STK32CQ86UX6 486 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 FAM71CQ8NEG0 241 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 GP6Q9HCN6 339 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 SDR39U1Q9NRG7 319 aaPredicted RBP16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 SERINC1Q9NRX5 453 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 ACER3Q9NUN7 267 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 ZIM2Q9NZV7 527 aa16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 C6orf203Q9P0P8 240 aaPredicted RBP16.43■□□□□ 0.22
PRPF40A-209ENST00000486100 HIVEP1P15822 2718 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 DEFB108AA8MXU0 73 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 RFXANKO14593 260 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 UBDO15205 165 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 ATE1O95260 518 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 KRT75O95678 551 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 SYPL1Q16563 259 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 TMEM201Q5SNT2 666 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 ANKRD34AQ69YU3 496 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 C3orf33Q6P1S2 294 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 STAC2Q6ZMT1 411 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 LRRC74BQ6ZQY2 392 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 C22orf34Q6ZV56 151 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 ZNF550Q7Z398 422 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 TUSC5Q8IXB3 177 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 SLC43A2Q8N370 569 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 ANKFN1Q8N957 763 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 ABHD3Q8WU67 409 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 MARK4Q96L34 752 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 ALPK1Q96QP1 1244 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 OR52B2Q96RD2 323 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 QRSL1Q9H0R6 528 aaKnown RBP16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 MTHFD2LQ9H903 347 aaPredicted RBP16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 USH1CQ9Y6N9 552 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 CELSR1Q9NYQ6 3014 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 F8P00451 2351 aa16.42■□□□□ 0.22
PRPF40A-209ENST00000486100 A0A1W2PNR3 127 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 SIAH2O43255 324 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 BCAS1O75363 584 aaPredicted RBP16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 YES1P07947 543 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 PPP3CBP16298 524 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 ENPP1P22413 925 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 APOBEC1P41238 236 aaKnown RBP16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 MAGEA8P43361 318 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 MERTKQ12866 999 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 COX20Q5RI15 118 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 EPGNQ6UW88 154 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 PLEKHM3Q6ZWE6 761 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 PMM1Q92871 262 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 ZC3HAV1LQ96H79 300 aaKnown RBP16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 C7orf26Q96N11 449 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 SLC38A1Q9H2H9 487 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 C12orf49Q9H741 205 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 EXOSC3Q9NQT5 275 aaKnown RBP16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 KLHL13Q9P2N7 655 aa16.41■□□□□ 0.22
PRPF40A-209ENST00000486100 TEP1Q99973 2627 aaKnown RBP16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 AGAP5A6NIR3 686 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 CLDN24A6NM45 220 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 DIAPH2O60879 1101 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 CHRM4P08173 479 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 ZCCHC18P0CG32 403 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 RYKP34925 604 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 DEFB113Q30KQ7 82 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 TMPPEQ6ZT21 453 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 MSANTD1Q6ZTZ1 278 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 NUFIP2Q7Z417 695 aaKnown RBP16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 HMGN2P46Q86SG4 172 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 CMIPQ8IY22 773 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 ARFGAP2Q8N6H7 521 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 ZNF563Q8TA94 476 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 PNPT1Q8TCS8 783 aaKnown RBP16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 PIK3IP1Q96FE7 263 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 ATP6V1G3Q96LB4 118 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 OR5B2Q96R09 309 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 CCDC106Q9BWC9 280 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 RMND5AQ9H871 391 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 SLC6A13Q9NSD5 602 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 GPR52Q9Y2T5 361 aa16.4■□□□□ 0.22
PRPF40A-209ENST00000486100 AKAP6Q13023 2319 aa16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 TGDSO95455 350 aa16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 NR2F1P10589 423 aa16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 FKBP2P26885 142 aaKnown RBP16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 POLR2JP52435 117 aaKnown RBP16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 MVDP53602 400 aa16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 MIER2Q8N344 545 aa16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 LRRC8CQ8TDW0 803 aa16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 SLC25A43Q8WUT9 341 aaPredicted RBP16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 CNOT9Q92600 299 aaKnown RBP16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 ITCHQ96J02 903 aa16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 TACO1Q9BSH4 297 aaKnown RBP16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 OR10A4Q9H209 315 aa16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 BCO1Q9HAY6 547 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms