RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 OR5B2Q96R09 309 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 RMND5AQ9H871 391 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 SERINC1Q9NRX5 453 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 ELOVL5Q9NYP7 299 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 ZIM2Q9NZV7 527 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 PLEKHA6Q9Y2H5 1048 aa15.79■□□□□ 0.12
COL6A1-204ENST00000486023 C16orf97H3BN30 126 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 CHRM4P08173 479 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 PABPC4LP0CB38 370 aaKnown RBP15.78■□□□□ 0.12
COL6A1-204ENST00000486023 ETFAP13804 333 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 UGT2B10P36537 528 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 PGM1P36871 562 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 IDH3AP50213 366 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 AQP5P55064 265 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 SELENBP1Q13228 472 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 LSRQ86X29 649 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-204ENST00000486023 MED12LQ86YW9 2145 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 ARFGAP2Q8N6H7 521 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 OR6K3Q8NGY3 331 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 TMEM234Q8WY98 164 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 CNOT9Q92600 299 aaKnown RBP15.78■□□□□ 0.12
COL6A1-204ENST00000486023 CPNE4Q96A23 557 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-204ENST00000486023 ZNF775Q96BV0 537 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-204ENST00000486023 AURKBQ96GD4 344 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-204ENST00000486023 C7orf26Q96N11 449 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 TRNT1Q96Q11 434 aaKnown RBP15.78■□□□□ 0.12
COL6A1-204ENST00000486023 EBF4Q9BQW3 602 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 TCF7L2Q9NQB0 619 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 POLE3Q9NRF9 147 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 SDR39U1Q9NRG7 319 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-204ENST00000486023 INTS9Q9NV88 658 aaKnown RBP15.78■□□□□ 0.12
COL6A1-204ENST00000486023 LIPT1Q9Y234 373 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 SLC35A3Q9Y2D2 325 aa15.78■□□□□ 0.12
COL6A1-204ENST00000486023 AKAP9Q99996 3911 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 FAM221AA4D161 298 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 SS18L1O75177 396 aaPredicted RBP15.77■□□□□ 0.12
COL6A1-204ENST00000486023 IL7RP16871 459 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 ENPP1P22413 925 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 DNASE1P24855 282 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 IDH2P48735 452 aaKnown RBP15.77■□□□□ 0.12
COL6A1-204ENST00000486023 ZNF239Q16600 458 aaKnown RBP15.77■□□□□ 0.12
COL6A1-204ENST00000486023 TMEM201Q5SNT2 666 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 SLC2A7Q6PXP3 512 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 FCRLAQ7L513 359 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 TUSC5Q8IXB3 177 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 SAP130Q9H0E3 1048 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 MTHFD2LQ9H903 347 aaPredicted RBP15.77■□□□□ 0.12
COL6A1-204ENST00000486023 PLSCR4Q9NRQ2 329 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 GLRX2Q9NS18 164 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 ST6GALNAC2Q9UJ37 374 aa15.77■□□□□ 0.12
COL6A1-204ENST00000486023 FAM234BA2RU67 622 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 AP3D1O14617 1153 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 PRKD3O94806 890 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 PPP2R2AP63151 447 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 GUSBP1Q15486 140 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 SLC25A53Q5H9E4 307 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 LRRC74BQ6ZQY2 392 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 PLEKHM3Q6ZWE6 761 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 NUFIP2Q7Z417 695 aaKnown RBP15.76■□□□□ 0.11
COL6A1-204ENST00000486023 STK32CQ86UX6 486 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 ST8SIA1Q92185 356 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 PIK3IP1Q96FE7 263 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 SLC38A1Q9H2H9 487 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 COQ10BQ9H8M1 238 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 TPT1P8Q9HAU6 139 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 CTPS2Q9NRF8 586 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 ACER3Q9NUN7 267 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 ZNF226Q9NYT6 803 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 EDARQ9UNE0 448 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 TESMINQ9Y4I5 508 aa15.76■□□□□ 0.11
COL6A1-204ENST00000486023 HMGB1P1B2RPK0 211 aaPredicted RBP15.75■□□□□ 0.11
COL6A1-204ENST00000486023 HRGP04196 525 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 BCHEP06276 602 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 KLK2P20151 261 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 AGTR1P30556 359 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 KEAP1Q14145 624 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 GNA13Q14344 377 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 RNPS1Q15287 305 aaKnown RBP15.75■□□□□ 0.11
COL6A1-204ENST00000486023 C3orf33Q6P1S2 294 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 RNF128Q8TEB7 428 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 WDR60Q8WVS4 1066 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 CCDC167Q9P0B6 97 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 P2RX2Q9UBL9 471 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 MPDZO75970 2070 aa15.75■□□□□ 0.11
COL6A1-204ENST00000486023 TEP1Q99973 2627 aaKnown RBP15.75■□□□□ 0.11
COL6A1-204ENST00000486023 AGAP5A6NIR3 686 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 SULT2B1O00204 365 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 NR5A2O00482 541 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 TGDSO95455 350 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 GUSBP08236 651 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 CCKARP32238 428 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 RAC3P60763 192 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 DSTNP60981 165 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 RPS26P11Q5JNZ5 115 aaPredicted RBP15.74■□□□□ 0.11
COL6A1-204ENST00000486023 BEND4Q6ZU67 534 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 C22orf34Q6ZV56 151 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.74■□□□□ 0.11
COL6A1-204ENST00000486023 VRK2Q86Y07 508 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 PEX5LQ8IYB4 626 aa15.74■□□□□ 0.11
COL6A1-204ENST00000486023 FANCFQ9NPI8 374 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms