RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 FESP07332 822 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 ITGA2P17301 1181 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 KRT20P35900 424 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 PLCXD2Q0VAA5 305 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 GPR68Q15743 365 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 NNATQ16517 81 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 DUSP7Q16829 419 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 ZSWIM7Q19AV6 140 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 EIPR1Q53HC9 387 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 B3GNT6Q6ZMB0 384 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 C3P1Q6ZMU1 363 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 OLIG3Q7RTU3 272 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 PIWIL3Q7Z3Z3 882 aaKnown RBP15.47■□□□□ 0.07
VIM-205ENST00000485947 VTCN1Q7Z7D3 282 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 SMYD1Q8NB12 490 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 ACBD4Q8NC06 268 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 GPR32P1Q8NGA4 272 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 OR4N2Q8NGD1 307 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 OR5M3Q8NGP4 307 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 TMCO6Q96DC7 493 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 HOXD1Q9GZZ0 328 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 UBQLN3Q9H347 655 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 ARMC7Q9H6L4 198 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 EXO5Q9H790 373 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 SLC24A3Q9HC58 644 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 KLHL28Q9NXS3 571 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 RIMS3Q9UJD0 308 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 ZNF407Q9C0G0 2248 aa15.47■□□□□ 0.07
VIM-205ENST00000485947 EXPH5Q8NEV8 1989 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 DNAJC13O75165 2243 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 AHRRA9YTQ3 701 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 LGI1O95970 557 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 IGKV1D-16P01601 117 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 RFPL3SP0C7P2 107 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 NID1P14543 1247 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 IL7RP16871 459 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 GRNP28799 593 aaKnown RBP15.46■□□□□ 0.07
VIM-205ENST00000485947 MASP1P48740 699 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 PNLIPRP2P54317 469 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 ATP12AP54707 1039 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 ATP6AP1Q15904 470 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 ZNF141Q15928 474 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 NHSL2Q5HYW2 709 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 RNF220Q5VTB9 566 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 TIGD3Q6B0B8 471 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 GDF7Q7Z4P5 450 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 PM20D2Q8IYS1 436 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 MARVELD2Q8N4S9 558 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 LRTOMTQ8WZ04 291 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 HGDQ93099 445 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 OMA1Q96E52 524 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 C7orf34Q96L11 122 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 JSRP1Q96MG2 331 aaPredicted RBP15.46■□□□□ 0.07
VIM-205ENST00000485947 PKP2Q99959 881 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 TTYH2Q9BSA4 534 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 ENKD1Q9H0I2 346 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 PNPLA3Q9NST1 481 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 FBXO34Q9NWN3 711 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 SLC13A4Q9UKG4 626 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 ZNF443Q9Y2A4 671 aaPredicted RBP15.46■□□□□ 0.07
VIM-205ENST00000485947 SLC9A8Q9Y2E8 581 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 C15orf41Q9Y2V0 281 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 LIPGQ9Y5X9 500 aa15.46■□□□□ 0.07
VIM-205ENST00000485947 NPIPB9F8W1W9 429 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 CASQ2O14958 399 aaPredicted RBP15.45■□□□□ 0.06
VIM-205ENST00000485947 ZNHIT1O43257 154 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 TPST1O60507 370 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 TSPAN2O60636 221 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 UGT2B17O75795 530 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 IFNW1P05000 195 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 CELA3AP09093 270 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 GDF1P27539 372 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 IL12BP29460 328 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 GCKP35557 465 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 RFX3P48380 749 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 PMPCAQ10713 525 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 EFR3AQ14156 821 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 VRK2Q86Y07 508 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 MCEMP1Q8IX19 187 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 CMIPQ8IY22 773 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 LILRA2Q8N149 483 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 ZNF527Q8NB42 609 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 OR10Q1Q8NGQ4 319 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 TMBIM1Q969X1 311 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 BDH2Q9BUT1 245 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 QRSL1Q9H0R6 528 aaKnown RBP15.45■□□□□ 0.06
VIM-205ENST00000485947 METTL7AQ9H8H3 244 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 KCNJ16Q9NPI9 418 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.45■□□□□ 0.06
VIM-205ENST00000485947 DNAJB9Q9UBS3 223 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 RNF6Q9Y252 685 aa15.45■□□□□ 0.06
VIM-205ENST00000485947 ADGRG4Q8IZF6 3080 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 CLOCKO15516 846 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 REM1O75628 298 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 CBR3O75828 277 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 CST1P01037 141 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 NGFRP08138 427 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 SSTR2P30874 369 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 SESN3P58005 492 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 EEF1A1P68104 462 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms