RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 SLAMF8Q9P0V8 285 aa13.41□□□□□ -0.26
YIF1A-208ENST00000485820 CSMD2Q7Z408 3487 aa13.41□□□□□ -0.26
YIF1A-208ENST00000485820 FREM1Q5H8C1 2179 aa13.41□□□□□ -0.26
YIF1A-208ENST00000485820 CSMD1Q96PZ7 3565 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 A0A096LPI6 279 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 CLIC1O00299 241 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 SMNDC1O75940 238 aaKnown RBP eCLIP13.4□□□□□ -0.26
YIF1A-208ENST00000485820 SYNGR4O95473 234 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 CD8BP10966 210 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 EPXP11678 715 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 FCGR2AP12318 317 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 DSTNP60981 165 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 SIRPAP78324 504 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 IRX1P78414 480 aaPredicted RBP13.4□□□□□ -0.26
YIF1A-208ENST00000485820 FAM27E3Q08E93 113 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 SELENBP1Q13228 472 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 RGNQ15493 299 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 AGKQ53H12 422 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 PAGE3Q5JUK9 113 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 LRIF1Q5T3J3 769 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 PLEKHM3Q6ZWE6 761 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 MSRB3Q8IXL7 192 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 CMIPQ8IY22 773 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 TMEM234Q8WY98 164 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 ROBO4Q8WZ75 1007 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 GMPPAQ96IJ6 420 aaPredicted RBP13.4□□□□□ -0.26
YIF1A-208ENST00000485820 SRXN1Q9BYN0 137 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 OPN3Q9H1Y3 402 aaPredicted RBP13.4□□□□□ -0.26
YIF1A-208ENST00000485820 COQ10BQ9H8M1 238 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 GLRX2Q9NS18 164 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 SLC25A37Q9NYZ2 338 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 P2RX2Q9UBL9 471 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 MCTS1Q9ULC4 181 aaKnown RBP13.4□□□□□ -0.26
YIF1A-208ENST00000485820 CLEC4AQ9UMR7 237 aa13.4□□□□□ -0.26
YIF1A-208ENST00000485820 GJE1A6NN92 205 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 SS18L1O75177 396 aaPredicted RBP13.39□□□□□ -0.27
YIF1A-208ENST00000485820 DBIP07108 87 aaKnown RBP13.39□□□□□ -0.27
YIF1A-208ENST00000485820 BMP2P12643 396 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 RYKP34925 604 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 CPA2P48052 419 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 HPCAP84074 193 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 SQLEQ14534 574 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 GTF2IRD2BQ6EKJ0 949 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 PPP4R4Q6NUP7 873 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 GTF2IRD2Q86UP8 949 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 LURAP1LQ8IV03 231 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 ARFGAP2Q8N6H7 521 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 CPNE4Q96A23 557 aaPredicted RBP13.39□□□□□ -0.27
YIF1A-208ENST00000485820 CCDC106Q9BWC9 280 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 ZNF385DQ9H6B1 395 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 RASSF1Q9NS23 344 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 DNAJB12Q9NXW2 375 aaKnown RBP13.39□□□□□ -0.27
YIF1A-208ENST00000485820 ELOVL5Q9NYP7 299 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 DCTN4Q9UJW0 460 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 GMEB1Q9Y692 573 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 DSPPQ9NZW4 1301 aa13.39□□□□□ -0.27
YIF1A-208ENST00000485820 AKAP6Q13023 2319 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 A0A1W2PNR3 127 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 A6NNC1 897 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 NR5A2O00482 541 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 AP3D1O14617 1153 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 NUDT7P0C024 238 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 IL7RP16871 459 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 ENPP1P22413 925 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 CD79BP40259 229 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 APOBEC1P41238 236 aaKnown RBP13.38□□□□□ -0.27
YIF1A-208ENST00000485820 IDH2P48735 452 aaKnown RBP13.38□□□□□ -0.27
YIF1A-208ENST00000485820 RAC3P60763 192 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 MERTKQ12866 999 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 ZNF239Q16600 458 aaKnown RBP13.38□□□□□ -0.27
YIF1A-208ENST00000485820 TMEM200AQ86VY9 491 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 VRK2Q86Y07 508 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 ADGRG3Q86Y34 549 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 PEX5LQ8IYB4 626 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 RNF128Q8TEB7 428 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 DACH2Q96NX9 599 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 NPHS2Q9NP85 383 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 TIGARQ9NQ88 270 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 CTPS2Q9NRF8 586 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 SERINC1Q9NRX5 453 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 RLIMQ9NVW2 624 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 THUMPD1Q9NXG2 353 aaKnown RBP13.38□□□□□ -0.27
YIF1A-208ENST00000485820 CALML5Q9NZT1 146 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 VAPAQ9P0L0 249 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 MYO9AB2RTY4 2548 aa13.38□□□□□ -0.27
YIF1A-208ENST00000485820 TRBV5-3A0A0A0MS03 114 aa13.37□□□□□ -0.27
YIF1A-208ENST00000485820 A0A0G2JPF8 293 aa13.37□□□□□ -0.27
YIF1A-208ENST00000485820 A0A1W2PP18 115 aa13.37□□□□□ -0.27
YIF1A-208ENST00000485820 HNRNPCL2B2RXH8 293 aa13.37□□□□□ -0.27
YIF1A-208ENST00000485820 HNRNPCL3B7ZW38 293 aa13.37□□□□□ -0.27
YIF1A-208ENST00000485820 HNRNPCL1O60812 293 aaKnown RBP13.37□□□□□ -0.27
YIF1A-208ENST00000485820 PLGP00747 810 aaPredicted RBP13.37□□□□□ -0.27
YIF1A-208ENST00000485820 BCHEP06276 602 aa13.37□□□□□ -0.27
YIF1A-208ENST00000485820 HNRNPCL4P0DMR1 293 aa13.37□□□□□ -0.27
YIF1A-208ENST00000485820 NCF2P19878 526 aaPredicted RBP13.37□□□□□ -0.27
YIF1A-208ENST00000485820 CPOXP36551 454 aa13.37□□□□□ -0.27
YIF1A-208ENST00000485820 CRISP3P54108 245 aa13.37□□□□□ -0.27
YIF1A-208ENST00000485820 CTBP2P56545 445 aa13.37□□□□□ -0.27
YIF1A-208ENST00000485820 FADDQ13158 208 aa13.37□□□□□ -0.27
YIF1A-208ENST00000485820 GNA13Q14344 377 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms