RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 CDRT15Q96T59 188 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 SLC6A15Q9H2J7 730 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 MUC13Q9H3R2 512 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 RUBCNLQ9H714 662 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 CALHM2Q9HA72 323 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 COQ3Q9NZJ6 369 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 ABCD2Q9UBJ2 740 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 MAGEL2Q9UJ55 1249 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 SLC5A6Q9Y289 635 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 ZNF835Q9Y2P0 537 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 FBN2P35556 2912 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 EXPH5Q8NEV8 1989 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 GTF3C1Q12789 2109 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 ICE1Q9Y2F5 2266 aa7.49□□□□□ -1.21
SF3A1-208ENST00000485618 UTP20O75691 2785 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 ZNF407Q9C0G0 2248 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 E9PLN8 166 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 H3BML4 177 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CXCR6O00574 342 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CCL21O00585 134 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 FMO6PO60774 539 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 MFN2O95140 757 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 SYNGR4O95473 234 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CLDN1O95832 211 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 C1QCP02747 245 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CELA3AP09093 270 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 FCGR2AP12318 317 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 HSD17B1P14061 328 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 PRKCAP17252 672 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 HTR1EP28566 365 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CA7P43166 264 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 GSK3BP49841 420 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 GFRA1P56159 465 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 PCBP3P57721 371 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CARD18P57730 90 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 RGS8P57771 180 aaPredicted RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 SESN3P58005 492 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CSNK2A1P68400 391 aaPredicted RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 SELENBP1Q13228 472 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 SELPLGQ14242 412 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 MAPK11Q15759 364 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 SGCBQ16585 318 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 SLC25A53Q5H9E4 307 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 SWT1Q5T5J6 900 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 OR2A2Q6IF42 318 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 C3orf33Q6P1S2 294 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 C8orf82Q6P1X6 216 aaPredicted RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CBLN3Q6UW01 205 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 C5orf46Q6UWT4 87 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 ARSKQ6UWY0 536 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 B3GNT6Q6ZMB0 384 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 ZNF836Q6ZNA1 936 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 FKBP9P1Q75LS8 142 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 P4HA3Q7Z4N8 544 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CYP4Z1Q86W10 505 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CADM2Q8N3J6 435 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 FAM71CQ8NEG0 241 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 OR52E4Q8NGH9 312 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 OR5M9Q8NGP3 310 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 FBXO27Q8NI29 283 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 FIG4Q92562 907 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CNOT9Q92600 299 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 RELTQ969Z4 430 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 MCUR1Q96AQ8 359 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 DDIT4LQ96D03 193 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 LRRC46Q96FV0 321 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 TM9SF2Q99805 663 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 VKORC1Q9BQB6 163 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 UGT2B28Q9BY64 529 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 PRRG4Q9BZD6 226 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 RTN4RQ9BZR6 473 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 TRIM15Q9C019 465 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 POLR2J2Q9GZM3 115 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 QRSL1Q9H0R6 528 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 POLR2J3Q9H1A7 115 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 CMTM6Q9NX76 183 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 DNAJB12Q9NXW2 375 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 TESQ9UGI8 421 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 KCNE5Q9UJ90 142 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 ERRFI1Q9UJM3 462 aaPredicted RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 MCTS1Q9ULC4 181 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 SAMD4AQ9UPU9 718 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 SLC6A5Q9Y345 797 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 ZNF337Q9Y3M9 751 aa7.48□□□□□ -1.21
SF3A1-208ENST00000485618 FAM32AQ9Y421 112 aaKnown RBP7.48□□□□□ -1.21
SF3A1-208ENST00000485618 SHANK1Q9Y566 2161 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 SPTBN1Q01082 2364 aaKnown RBP7.47□□□□□ -1.21
SF3A1-208ENST00000485618 ELOA3DA6NLF2 546 aaPredicted RBP7.47□□□□□ -1.21
SF3A1-208ENST00000485618 HSPB2A8KAH6 182 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 ETV2O00321 342 aaPredicted RBP7.47□□□□□ -1.21
SF3A1-208ENST00000485618 NME4O00746 187 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 LRRTM2O43300 516 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 ZNF208O43345 1280 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 ZNF682O95780 498 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 LGI1O95970 557 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 LDLRP01130 860 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 IL2RAP01589 272 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 IFNW1P05000 195 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 FESP07332 822 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 TFPIP10646 304 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms