RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 RAB3CQ96E17 227 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 NPAS2Q99743 824 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 OMDQ99983 421 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 GFRA4Q9GZZ7 299 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 POLR3FQ9H1D9 316 aaPredicted RBP3.23□□□□□ -1.89
FN1-222ENST00000485567 ADNPQ9H2P0 1102 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 TDRD3Q9H7E2 651 aaKnown RBP3.23□□□□□ -1.89
FN1-222ENST00000485567 NEK6Q9HC98 313 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 ZFP14Q9HCL3 533 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 LZTFL1Q9NQ48 299 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 EXOSC3Q9NQT5 275 aaKnown RBP3.23□□□□□ -1.89
FN1-222ENST00000485567 SDHAF3Q9NRP4 125 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 NUDT15Q9NV35 164 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 ELOVL2Q9NXB9 296 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 MRPL39Q9NYK5 338 aaKnown RBP3.23□□□□□ -1.89
FN1-222ENST00000485567 MTRF1LQ9UGC7 380 aaKnown RBP3.23□□□□□ -1.89
FN1-222ENST00000485567 KLK13Q9UKR3 277 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 NTNG1Q9Y2I2 539 aa3.23□□□□□ -1.89
FN1-222ENST00000485567 TCF20Q9UGU0 1960 aaKnown RBP3.23□□□□□ -1.89
FN1-222ENST00000485567 SH3TC1Q8TE82 1336 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 IGKV3D-15A0A087WSY6 115 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 A0A1W2PNV4 684 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 ERICH2A1L162 156 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 FAM74A7A6NL05 159 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 ZNF487B1APH4 448 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 SHISA9B4DS77 424 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 TCP11X1B4DZS4 312 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 ZSCAN12O43309 604 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 LCMT2O60294 686 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 GALR3O60755 368 aaPredicted RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 CDH16O75309 829 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 TRIM3O75382 744 aaPredicted RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 CBR3O75828 277 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 TM7SF2O76062 418 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 B3GAT3O94766 335 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 TGM6O95932 706 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 IGF1P05019 195 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 HBQ1P09105 142 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 SLC2A3P11169 496 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 UMPSP11172 480 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 SDC1P18827 310 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 SRMP19623 302 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 TPSB2P20231 275 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 CYP2B6P20813 491 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 NMT1P30419 496 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 GRIA1P42261 906 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 RPL34P49207 117 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 CSRP3P50461 194 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 ARHGDIBP52566 201 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 BLVRAP53004 296 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 RPL23AP62750 156 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 CBX1P83916 185 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 MAB21L1Q13394 359 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 ABRAXAS2Q15018 415 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 TPSAB1Q15661 275 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 CAMK4Q16566 473 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 CYP51A1Q16850 503 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 SNAI3Q3KNW1 292 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 ALKBH6Q3KRA9 238 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 FAM74A3Q4VXF1 159 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 NHLRC3Q5JS37 347 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 SPANXN2Q5MJ10 180 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 CELF3Q5SZQ8 465 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 LGSNQ5TDP6 509 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 PRAMEF5Q5TYX0 476 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 PRAMEF6Q5VXH4 476 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 LEMD1Q68G75 181 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 TTC23LQ6PF05 361 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 GPRIN3Q6ZVF9 776 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 PRSS48Q7RTY5 328 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 DPY19L4Q7Z388 723 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 TIPARPQ7Z3E1 657 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 SLC47A2Q86VL8 602 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 IFNEQ86WN2 208 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 TMEM17Q86X19 198 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 BPIFB2Q8N4F0 458 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 RNF10Q8N5U6 811 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 ASCC1Q8N9N2 400 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 ZSCAN4Q8NAM6 433 aaPredicted RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 MAPK1IP1LQ8NDC0 245 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 SPATA4Q8NEY3 305 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 OR4Q3Q8NH05 313 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 RFESDQ8TAC1 157 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 PNPT1Q8TCS8 783 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 LKAAEAR1Q8TD35 194 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 PDCD6IPQ8WUM4 868 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 ITLN1Q8WWA0 313 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 C18orf25Q96B23 403 aaPredicted RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 SGK3Q96BR1 496 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 CCNL2Q96S94 520 aaPredicted RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 TMEM121Q9BTD3 319 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 RHOJQ9H4E5 214 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 MRPL47Q9HD33 250 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 APMAPQ9HDC9 416 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 MEPEQ9NQ76 525 aaPredicted RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 IMPAD1Q9NX62 359 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 KLHL28Q9NXS3 571 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 PEF1Q9UBV8 284 aaKnown RBP3.22□□□□□ -1.89
FN1-222ENST00000485567 ANAPC7Q9UJX3 599 aa3.22□□□□□ -1.89
FN1-222ENST00000485567 IFT52Q9Y366 437 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms