RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SSX2Q16385 188 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 DPYSL2Q16555 572 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 NDUFA9Q16795 377 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 GGTA1PQ4G0N0 100 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 C10orf120Q5SQS8 335 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 BEND3Q5T5X7 828 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 METTL11BQ5VVY1 283 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 ZSCAN25Q6NSZ9 544 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 ACSM5Q6NUN0 579 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 CCDC80Q76M96 950 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 PRSS48Q7RTY5 328 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 SLC38A6Q8IZM9 456 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 NECAB1Q8N987 351 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 OR56B2PQ8NGI1 322 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 CNIH3Q8TBE1 160 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 RPL3LQ92901 407 aaKnown RBP2.86□□□□□ -1.95
SMC4-215ENST00000484799 FBXO32Q969P5 355 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 NT5C3BQ969T7 300 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 TMEM80Q96HE8 168 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 ZNF285Q96NJ3 590 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 RBM14Q96PK6 669 aaKnown RBP2.86□□□□□ -1.95
SMC4-215ENST00000484799 CCT8L2Q96SF2 557 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 NPAS2Q99743 824 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 EDEM2Q9BV94 578 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 PPDPFQ9H3Y8 114 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 SGK2Q9HBY8 427 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 TIGARQ9NQ88 270 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 NUDT15Q9NV35 164 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 SMOXQ9NWM0 555 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 LCMT1Q9UIC8 334 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 SAMD4AQ9UPU9 718 aaKnown RBP2.86□□□□□ -1.95
SMC4-215ENST00000484799 ALG6Q9Y672 507 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 B4DXG7 233 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 SAP18O00422 153 aaKnown RBP2.85□□□□□ -1.95
SMC4-215ENST00000484799 NDUFB10O96000 172 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 ACTL6AO96019 429 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 CT45A10P0DMU9 189 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 GCFC2P16383 781 aaKnown RBP2.85□□□□□ -1.95
SMC4-215ENST00000484799 NCF2P19878 526 aaPredicted RBP2.85□□□□□ -1.95
SMC4-215ENST00000484799 MX1P20591 662 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 IMPDH1P20839 514 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 EPS15P42566 896 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 TDO2P48775 406 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 CCT3P49368 545 aaKnown RBP2.85□□□□□ -1.95
SMC4-215ENST00000484799 ARHGDIBP52566 201 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 ZNF133P52736 654 aaPredicted RBP2.85□□□□□ -1.95
SMC4-215ENST00000484799 EFNA3P52797 238 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 WNT4P56705 351 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 RPL8P62917 257 aaKnown RBP2.85□□□□□ -1.95
SMC4-215ENST00000484799 PUDPQ08623 228 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 IL18R1Q13478 541 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 MXD4Q14582 209 aaPredicted RBP2.85□□□□□ -1.95
SMC4-215ENST00000484799 PHYHD1Q5SRE7 291 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 PVRIGQ6DKI7 326 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 ZYG11AQ6WRX3 759 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 TRPM8Q7Z2W7 1104 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 TGIF2LXQ8IUE1 241 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 CDH26Q8IXH8 852 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 CLEC4FQ8N1N0 589 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 OR5D13Q8NGL4 314 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 OR1F12Q8NHA8 337 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 LINC01006Q8NI28 216 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 EFHD2Q96C19 240 aaPredicted RBP2.85□□□□□ -1.95
SMC4-215ENST00000484799 PELI1Q96FA3 418 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 ZNF799Q96GE5 643 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 OR5B2Q96R09 309 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 NPY6RQ99463 290 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 CCDC77Q9BR77 488 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 NIPSNAP3BQ9BS92 247 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 PARD6BQ9BYG5 372 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 NXF5Q9H1B4 397 aaKnown RBP2.85□□□□□ -1.95
SMC4-215ENST00000484799 LRRN3Q9H3W5 708 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 SMYD3Q9H7B4 428 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 VPS37BQ9H9H4 285 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 MEPEQ9NQ76 525 aaPredicted RBP2.85□□□□□ -1.95
SMC4-215ENST00000484799 PIGLQ9Y2B2 252 aa2.85□□□□□ -1.95
SMC4-215ENST00000484799 IGHV2-70DA0A0C4DH43 119 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 WI2-2373I1.2A0A1W2PRP0 233 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 CTAGE15A4D2H0 777 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 HELTA6NFD8 242 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 FRG2CA6NGY1 282 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 F5H6K3 240 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 G3V3Y1 287 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 SLC17A2O00624 439 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 ECI2O75521 394 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 CIB2O75838 187 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 GJB5O95377 273 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 F10P00742 488 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 CD55P08174 381 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 HOXC4P09017 264 aaPredicted RBP2.84□□□□□ -1.95
SMC4-215ENST00000484799 SLC2A3P11169 496 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 POU2F1P14859 743 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 ELK1P19419 428 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 SERPINA2P20848 420 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 NMT1P30419 496 aaKnown RBP2.84□□□□□ -1.95
SMC4-215ENST00000484799 GDI1P31150 447 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 YWHABP31946 246 aaKnown RBP2.84□□□□□ -1.95
SMC4-215ENST00000484799 ACVR1BP36896 505 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 OR1D4P47884 311 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 P2RY1P47900 373 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms