RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 FAM222BQ8WU58 562 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 WDR60Q8WVS4 1066 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 GTF2H4Q92759 462 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 MRGPRX4Q96LA9 322 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 TRNT1Q96Q11 434 aaKnown RBP10.99□□□□□ -0.65
MSH5-216ENST00000484309 CCDC28BQ9BUN5 200 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 PAIP1Q9H074 479 aaKnown RBP10.99□□□□□ -0.65
MSH5-216ENST00000484309 C12orf49Q9H741 205 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.99□□□□□ -0.65
MSH5-216ENST00000484309 CCDC167Q9P0B6 97 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 LIPT1Q9Y234 373 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 SLC35A3Q9Y2D2 325 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 ENO4A6NNW6 628 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 AP3D1O14617 1153 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 ADAM11O75078 769 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 CGAP01215 116 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 GUSBP08236 651 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 NUDT7P0C024 238 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 ZCCHC18P0CG32 403 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 EPXP11678 715 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 POU2F1P14859 743 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 KLK2P20151 261 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 CCNA2P20248 432 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 CAPN3P20807 821 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 ADH6P28332 368 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 SLC7A1P30825 629 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 CD79BP40259 229 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 EEF1A1P68104 462 aaKnown RBP10.98□□□□□ -0.65
MSH5-216ENST00000484309 GUSBP1Q15486 140 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 AGKQ53H12 422 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 SLC25A53Q5H9E4 307 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 EEF1A1P5Q5VTE0 462 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 FBXW10Q5XX13 1052 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 LRRC74BQ6ZQY2 392 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 MSANTD1Q6ZTZ1 278 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 PLEKHM3Q6ZWE6 761 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 ARFGAP2Q8N6H7 521 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 ABHD3Q8WU67 409 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 ST8SIA1Q92185 356 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 GMPPAQ96IJ6 420 aaPredicted RBP10.98□□□□□ -0.65
MSH5-216ENST00000484309 OR5B2Q96R09 309 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 CLEC4MQ9H2X3 399 aaPredicted RBP10.98□□□□□ -0.65
MSH5-216ENST00000484309 LIME1Q9H400 295 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 NPHS2Q9NP85 383 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 RASSF1Q9NS23 344 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 ZNF446Q9NWS9 450 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 PAQR5Q9NXK6 330 aaPredicted RBP10.98□□□□□ -0.65
MSH5-216ENST00000484309 P2RX2Q9UBL9 471 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 DCTN4Q9UJW0 460 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 EMC9Q9Y3B6 208 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 PCDHB14Q9Y5E9 798 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 OTOGQ6ZRI0 2925 aa10.98□□□□□ -0.65
MSH5-216ENST00000484309 SH3D21A4FU49 640 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 AGAP5A6NIR3 686 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 GJE1A6NN92 205 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 DNAJA2O60884 412 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 SS18L1O75177 396 aaPredicted RBP10.97□□□□□ -0.65
MSH5-216ENST00000484309 TFPIP10646 304 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 CD8BP10966 210 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 IL7RP16871 459 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 NCF2P19878 526 aaPredicted RBP10.97□□□□□ -0.65
MSH5-216ENST00000484309 ENPP1P22413 925 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 CCKARP32238 428 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 MRPL19P49406 292 aaKnown RBP10.97□□□□□ -0.65
MSH5-216ENST00000484309 TXNL4AP83876 142 aaKnown RBP10.97□□□□□ -0.65
MSH5-216ENST00000484309 SF3A3Q12874 501 aaKnown RBP eCLIP10.97□□□□□ -0.653e-13■■■■□ 21.7
MSH5-216ENST00000484309 PAGE3Q5JUK9 113 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 MRPL2Q5T653 305 aaKnown RBP10.97□□□□□ -0.65
MSH5-216ENST00000484309 ANKRD34AQ69YU3 496 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 C3orf33Q6P1S2 294 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 BLOC1S3Q6QNY0 202 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 ZNF836Q6ZNA1 936 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 FCRLAQ7L513 359 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 ZNF550Q7Z398 422 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 VRK2Q86Y07 508 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 MSRB3Q8IXL7 192 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 OR6K3Q8NGY3 331 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 RNF128Q8TEB7 428 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 TMEM234Q8WY98 164 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 CPNE4Q96A23 557 aaPredicted RBP10.97□□□□□ -0.65
MSH5-216ENST00000484309 SPDL1Q96EA4 605 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 ZC3HAV1LQ96H79 300 aaKnown RBP10.97□□□□□ -0.65
MSH5-216ENST00000484309 TMEM19Q96HH6 336 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 REXO5Q96IC2 774 aaKnown RBP10.97□□□□□ -0.65
MSH5-216ENST00000484309 CTPS2Q9NRF8 586 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 ACER3Q9NUN7 267 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 KLHL28Q9NXS3 571 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 SLAMF8Q9P0V8 285 aa10.97□□□□□ -0.65
MSH5-216ENST00000484309 TEP1Q99973 2627 aaKnown RBP10.96□□□□□ -0.65
MSH5-216ENST00000484309 A0A096LPI6 279 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 CLIC1O00299 241 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 ETV2O00321 342 aaPredicted RBP10.96□□□□□ -0.65
MSH5-216ENST00000484309 EDF1O60869 148 aaKnown RBP10.96□□□□□ -0.65
MSH5-216ENST00000484309 DBIP07108 87 aaKnown RBP10.96□□□□□ -0.65
MSH5-216ENST00000484309 TFPTP0C1Z6 253 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 HOXB9P17482 250 aaPredicted RBP10.96□□□□□ -0.65
MSH5-216ENST00000484309 RPS4Y1P22090 263 aaKnown RBP10.96□□□□□ -0.65
MSH5-216ENST00000484309 AGTR1P30556 359 aa10.96□□□□□ -0.65
MSH5-216ENST00000484309 IDH2P48735 452 aaKnown RBP10.96□□□□□ -0.65
MSH5-216ENST00000484309 SQLEQ14534 574 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms