RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 CDC40O60508 579 aaKnown RBP eCLIP12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 EIF4E2O60573 245 aaKnown RBP12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 TIPRLO75663 272 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 DIRAS1O95057 198 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 SP1P08047 785 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 NME2P22392 152 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 ZNF136P52737 540 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 C17orf67Q0P5P2 114 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 FOXD4Q12950 439 aaPredicted RBP12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 SLC25A25Q6KCM7 469 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 PLEKHM3Q6ZWE6 761 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 ZNF550Q7Z398 422 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 PACS2Q86VP3 889 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 ITLN2Q8WWU7 325 aaPredicted RBP12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 C7orf34Q96L11 122 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 ZNF597Q96LX8 424 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 KLHDC3Q9BQ90 382 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 PRR14Q9BWN1 585 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 CHID1Q9BWS9 393 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 DSN1Q9H410 356 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 EXOSC3Q9NQT5 275 aaKnown RBP12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 DEPPQ9NTK1 212 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 CCM2LQ9NUG4 571 aaPredicted RBP12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 KLF13Q9Y2Y9 288 aaPredicted RBP12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 NCKAP5O14513 1909 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 ABCA12Q86UK0 2595 aa12.15□□□□□ -0.46
ZKSCAN1-204ENST00000482979 TRGV8A0A0C4DH27 118 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 PINLYPA6NC86 204 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 ANKRD33BA6NCL7 494 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 ENO4A6NNW6 628 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 J3KTA2 159 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 SNPHO15079 494 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 HNRNPRO43390 633 aaKnown RBP12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 PEX1O43933 1283 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 ADAM11O75078 769 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 CNR1P21554 472 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 TCEA1P23193 301 aaKnown RBP12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 MEOX1P50221 254 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 P2RX1P51575 399 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 EPS8Q12929 822 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 ZFP1Q6P2D0 407 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 GALNTL5Q7Z4T8 443 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 CYP4Z1Q86W10 505 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 CADM2Q8N3J6 435 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 TMEM178AQ8NBL3 297 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 TOR1AIP2Q8NFQ8 470 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 OR2M7Q8NG81 312 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 OR1J4Q8NGS1 313 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 OR5W2Q8NH69 310 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 ZNF563Q8TA94 476 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 DUS3LQ96G46 650 aaKnown RBP12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 CCDC120Q96HB5 630 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 TMEM41AQ96HV5 264 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 FAM173AQ9BQD7 235 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 YY1AP1Q9H869 796 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 EVA1AQ9H8M9 152 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 S100A14Q9HCY8 104 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 IL1RAPQ9NPH3 570 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 TUBA8Q9NY65 449 aaPredicted RBP12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 TESQ9UGI8 421 aaKnown RBP12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 FAM32AQ9Y421 112 aaKnown RBP12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 ENPP4Q9Y6X5 453 aa12.14□□□□□ -0.47
ZKSCAN1-204ENST00000482979 B4DXG7 233 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 TRIM3O75382 744 aaPredicted RBP12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 SNX4O95219 450 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 CRYABP02511 175 aaKnown RBP12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 LINGO3P0C6S8 592 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 UQCRBP14927 111 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 ITGA2P17301 1181 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 PGCP20142 388 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 HTR2AP28223 471 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 RFC3P40938 356 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 ACAA2P42765 397 aaKnown RBP12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 CA7P43166 264 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 MAGEA2P43356 314 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 SLC6A8P48029 635 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 TAS2R41P59536 307 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 CBFBQ13951 182 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 GANABQ14697 944 aaKnown RBP12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 RCN1Q15293 331 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 AAGABQ6PD74 315 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 TSEN54Q7Z6J9 526 aaKnown RBP12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 PLCZ1Q86YW0 608 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 SULF2Q8IWU5 870 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 PAPD5Q8NDF8 572 aaKnown RBP12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 OR2M3Q8NG83 312 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 RNF217Q8TC41 542 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 SLC35B4Q969S0 331 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 SCMH1Q96GD3 660 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 ZNF300Q96RE9 604 aaPredicted RBP12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 ZNF559Q9BR84 538 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 NDUFAF4Q9P032 175 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 RHCGQ9UBD6 479 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 RPS6KB2Q9UBS0 482 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 SH3BGRL2Q9UJC5 107 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 FBXL2Q9UKC9 423 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 ICAM5Q9UMF0 924 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 BOKQ9UMX3 212 aaPredicted RBP12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 TESMINQ9Y4I5 508 aa12.13□□□□□ -0.47
ZKSCAN1-204ENST00000482979 IGLV3-32A0A0A0MS00 114 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms