RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 C1orf109Q9NX04 203 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 KCNS2Q9ULS6 477 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 PTGDR2Q9Y5Y4 395 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 SLC25A15Q9Y619 301 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 ATP23Q9Y6H3 246 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 KCNE3Q9Y6H6 103 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 PMF1-BGLAPU3KQ54 211 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 NUP214P35658 2090 aaPredicted RBP11.28□□□□□ -0.6
TMEM54-206ENST00000482771 H7C417 338 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 SLC28A1O00337 649 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 UROSP10746 265 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 BMP4P12644 408 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 GCAP28676 217 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 ATP12AP54707 1039 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 CHRNB3Q05901 458 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 SELENBP1Q13228 472 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 GGTLC2Q14390 218 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 QPRTQ15274 297 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 TIGD2Q4W5G0 525 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 SLC25A53Q5H9E4 307 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.27□□□□□ -0.61
TMEM54-206ENST00000482771 LIPNQ5VXI9 398 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 FAM166AQ6J272 317 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 ZNF544Q6NX49 715 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 CDC73Q6P1J9 531 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 ZNF614Q8N883 585 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 OR5W2Q8NH69 310 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 ARL8AQ96BM9 186 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 MSI2Q96DH6 328 aaKnown RBP11.27□□□□□ -0.61
TMEM54-206ENST00000482771 ZNF764Q96H86 408 aaPredicted RBP11.27□□□□□ -0.61
TMEM54-206ENST00000482771 STACQ99469 402 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 FMO2Q99518 471 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 INPP5KQ9BT40 448 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 QRSL1Q9H0R6 528 aaKnown RBP11.27□□□□□ -0.61
TMEM54-206ENST00000482771 ZCCHC3Q9NUD5 404 aaKnown RBP11.27□□□□□ -0.61
TMEM54-206ENST00000482771 DCDC2Q9UHG0 476 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 DTNAQ9Y4J8 743 aa11.27□□□□□ -0.61
TMEM54-206ENST00000482771 G3V2L1 256 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 H3BQF6 201 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 H6PDO95479 791 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 CSF3P09919 207 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 MYL2P10916 166 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 SDC1P18827 310 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 PRPH2P23942 346 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 APOBEC3AP31941 199 aaPredicted RBP11.26□□□□□ -0.61
TMEM54-206ENST00000482771 NTF4P34130 210 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 DIO1P49895 249 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 CCR4P51679 360 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 RFTN2Q52LD8 501 aaPredicted RBP11.26□□□□□ -0.61
TMEM54-206ENST00000482771 CFAP157Q5JU67 520 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 CLEC6AQ6EIG7 209 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 ZYG11AQ6WRX3 759 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 TMPPEQ6ZT21 453 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 MTDHQ86UE4 582 aaKnown RBP11.26□□□□□ -0.61
TMEM54-206ENST00000482771 TMCO5AQ8N6Q1 288 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 NOA1Q8NC60 698 aaKnown RBP11.26□□□□□ -0.61
TMEM54-206ENST00000482771 TOR1AIP2Q8NFQ8 470 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 ADAMTS15Q8TE58 950 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 APH1AQ96BI3 265 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 C3orf49Q96BT1 292 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 CCDC126Q96EE4 140 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 MUS81Q96NY9 551 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 FOXN4Q96NZ1 517 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 CCT7Q99832 543 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 THUMPD3Q9BV44 507 aaKnown RBP11.26□□□□□ -0.61
TMEM54-206ENST00000482771 ACTRT3Q9BYD9 372 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 SERINC1Q9NRX5 453 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 SIRT3Q9NTG7 399 aaPredicted RBP11.26□□□□□ -0.61
TMEM54-206ENST00000482771 ASB6Q9NWX5 421 aa11.26□□□□□ -0.61
TMEM54-206ENST00000482771 NOSIPQ9Y314 301 aaKnown RBP11.26□□□□□ -0.61
TMEM54-206ENST00000482771 ESPNB1AK53 854 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 NPIPB9F8W1W9 429 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 SULT2B1O00204 365 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 ZNF264O43296 627 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 EIF4E2O60573 245 aaKnown RBP11.25□□□□□ -0.61
TMEM54-206ENST00000482771 CYP7B1O75881 506 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 TGFAP01135 160 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 CCT3P49368 545 aaKnown RBP11.25□□□□□ -0.61
TMEM54-206ENST00000482771 PDLIM4P50479 330 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 FOXG1P55316 489 aaPredicted RBP11.25□□□□□ -0.61
TMEM54-206ENST00000482771 SESN3P58005 492 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 RUNX1T1Q06455 604 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 PDE7AQ13946 482 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 CBFBQ13951 182 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 SQLEQ14534 574 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 GABRA6Q16445 453 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 DCST2Q5T1A1 773 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 FRMD7Q6ZUT3 714 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 OR2T11Q8NH01 316 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 PRR14Q9BWN1 585 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 FKRPQ9H9S5 495 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 EML4Q9HC35 981 aaKnown RBP11.25□□□□□ -0.61
TMEM54-206ENST00000482771 EMC3Q9P0I2 261 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 EMCNQ9ULC0 261 aa11.25□□□□□ -0.61
TMEM54-206ENST00000482771 FAF1Q9UNN5 650 aaPredicted RBP11.25□□□□□ -0.61
TMEM54-206ENST00000482771 IGKV3D-15A0A087WSY6 115 aa11.24□□□□□ -0.61
TMEM54-206ENST00000482771 VWC2LB2RUY7 222 aa11.24□□□□□ -0.61
TMEM54-206ENST00000482771 ETV2O00321 342 aaPredicted RBP11.24□□□□□ -0.61
TMEM54-206ENST00000482771 KIAA0513O60268 411 aa11.24□□□□□ -0.61
TMEM54-206ENST00000482771 LINC00032P0C843 101 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms