RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 MASP1P48740 699 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 DAPP51397 102 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 ALDH3A2P51648 485 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 LSM11P83369 360 aaKnown RBP eCLIP15.99■□□□□ 0.15
UPF3A-206ENST00000480362 IZUMO2Q6UXV1 221 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 ZNF730Q6ZMV8 503 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 WDR88Q6ZMY6 472 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 LINC00471Q8N535 108 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 FADS6Q8N9I5 356 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 OR4K17Q8NGC6 315 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 OR4K5Q8NGD3 323 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 OR9Q2Q8NGE9 314 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 OR1J4Q8NGS1 313 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 TMEM255BQ8WV15 326 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 ACOT11Q8WXI4 607 aaPredicted RBP15.99■□□□□ 0.15
UPF3A-206ENST00000480362 HAS2Q92819 552 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 TMEM41AQ96HV5 264 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 MPP4Q96JB8 637 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 JSRP1Q96MG2 331 aaPredicted RBP15.99■□□□□ 0.15
UPF3A-206ENST00000480362 FEVQ99581 238 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 RBM4BQ9BQ04 359 aaKnown RBP15.99■□□□□ 0.15
UPF3A-206ENST00000480362 RBM4Q9BWF3 364 aaKnown RBP15.99■□□□□ 0.15
UPF3A-206ENST00000480362 ADAM19Q9H013 955 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 DEPPQ9NTK1 212 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 USE1Q9NZ43 259 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 FBXL2Q9UKC9 423 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 PRDM4Q9UKN5 801 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 A0A0G2JMM0 328 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 A0A1W2PPB8 328 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 A0A1W2PRS3 328 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 ARRDC5A6NEK1 342 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 KIR3DP1A8MWS1 328 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 C1QTNF9BB2RNN3 333 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 K7ENP7 123 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 OR10H3O60404 316 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 TRIM3O75382 744 aaPredicted RBP15.98■□□□□ 0.15
UPF3A-206ENST00000480362 SLC25A12O75746 678 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 HPRP00739 348 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 GASTP01350 101 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 ALPLP05186 524 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 C1QTNF9P0C862 333 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 ANXA8P13928 327 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 PTNP21246 168 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 TACR3P29371 465 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 AQP4P55087 323 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 GPR85P60893 370 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 ARG2P78540 354 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 PPP2R2BQ00005 443 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 SWT1Q5T5J6 900 aaKnown RBP15.98■□□□□ 0.15
UPF3A-206ENST00000480362 TIGD3Q6B0B8 471 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 ZNF770Q6IQ21 691 aaPredicted RBP15.98■□□□□ 0.15
UPF3A-206ENST00000480362 FAHD1Q6P587 224 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 INO80CQ6PI98 192 aaPredicted RBP15.98■□□□□ 0.15
UPF3A-206ENST00000480362 ARSKQ6UWY0 536 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 LINC00114Q6XXX2 140 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 RRM2BQ7LG56 351 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 PRICKLE2Q7Z3G6 844 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 LSRQ86X29 649 aaPredicted RBP15.98■□□□□ 0.15
UPF3A-206ENST00000480362 ATG16L2Q8NAA4 619 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 MDS2Q8NDY4 140 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 TMEM234Q8WY98 164 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 HS6ST2Q96MM7 605 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 PSD2Q9BQI7 771 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.98■□□□□ 0.15
UPF3A-206ENST00000480362 PTGES2Q9H7Z7 377 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 KIF17Q9P2E2 1029 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 DCHS1Q96JQ0 3298 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 AKAP13Q12802 2813 aa15.98■□□□□ 0.15
UPF3A-206ENST00000480362 PCNX3Q9H6A9 2034 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 A0A087WUJ7 227 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 MED19A0JLT2 244 aaPredicted RBP15.97■□□□□ 0.15
UPF3A-206ENST00000480362 C7orf72A4D263 438 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 ELOA3DA6NLF2 546 aaPredicted RBP15.97■□□□□ 0.15
UPF3A-206ENST00000480362 H0YJX3 145 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 SP1P08047 785 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 PNMTP11086 282 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 ZNF41P51814 821 aaPredicted RBP15.97■□□□□ 0.15
UPF3A-206ENST00000480362 ELOA3BQ3SY89 546 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 KDM4DQ6B0I6 523 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 SLC25A25Q6KCM7 469 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 PGBD2Q6P3X8 592 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 TTC33Q6PID6 262 aaPredicted RBP15.97■□□□□ 0.15
UPF3A-206ENST00000480362 IGFL2Q6UWQ7 119 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 MBOAT2Q6ZWT7 520 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 ATG4DQ86TL0 474 aaPredicted RBP15.97■□□□□ 0.15
UPF3A-206ENST00000480362 AQP11Q8NBQ7 271 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 ELOA3Q8NG57 546 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 TMEM239Q8WW34 195 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 ST8SIA1Q92185 356 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 GNRHR2Q96P88 292 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 FAM173AQ9BQD7 235 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 HES7Q9BYE0 225 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 MED17Q9NVC6 651 aa15.97■□□□□ 0.15
UPF3A-206ENST00000480362 TUBA8Q9NY65 449 aaPredicted RBP15.97■□□□□ 0.15
UPF3A-206ENST00000480362 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 FAM47E-STBD1D6RA91 191 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 CBR3O75828 277 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 WISP1O95388 367 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 POU2F1P14859 743 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 CD46P15529 392 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms