RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 CDCA4Q9BXL8 241 aa13.37□□□□□ -0.27
PKNOX1-206ENST00000480179 TGIF2Q9GZN2 237 aa13.37□□□□□ -0.27
PKNOX1-206ENST00000480179 WWTR1Q9GZV5 400 aa13.37□□□□□ -0.27
PKNOX1-206ENST00000480179 HOXD1Q9GZZ0 328 aa13.37□□□□□ -0.27
PKNOX1-206ENST00000480179 OR52D1Q9H346 318 aa13.37□□□□□ -0.27
PKNOX1-206ENST00000480179 MEPEQ9NQ76 525 aaPredicted RBP13.37□□□□□ -0.27
PKNOX1-206ENST00000480179 UBQLN4Q9NRR5 601 aa13.37□□□□□ -0.27
PKNOX1-206ENST00000480179 SLC35A3Q9Y2D2 325 aa13.37□□□□□ -0.27
PKNOX1-206ENST00000480179 EFCAB7A8K855 629 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 SURF4O15260 269 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 ICOSLGO75144 302 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 REM1O75628 298 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 RFPL3O75679 317 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 APOL3O95236 402 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 BCL10O95999 233 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 UBL4AP11441 157 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 CSRP1P21291 193 aaKnown RBP13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 DUSP3P51452 185 aaPredicted RBP13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 DCAF7P61962 342 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 DCDP81605 110 aaKnown RBP13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 EFNB1P98172 346 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 PLCXD2Q0VAA5 305 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 SLC25A30Q5SVS4 291 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 ZBTB46Q86UZ6 589 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 PPP1R3BQ86XI6 285 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 LSMEM1Q8N8F7 131 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 C7orf57Q8NEG2 295 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 OR2T33Q8NG76 320 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 OR52L1Q8NGH7 329 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 PHOSPHO1Q8TCT1 267 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 BRIX1Q8TDN6 353 aaKnown RBP13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 FGF11Q92914 225 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 OR5M11Q96RB7 305 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 MESP1Q9BRJ9 268 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 UBQLN3Q9H347 655 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 HHATLQ9HCP6 504 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 MRTO4Q9UKD2 239 aaKnown RBP13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 IGLV3-12A0A075B6K2 115 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 TRAV27A0A087WT01 109 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 IDSB3KWA1 339 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 SLC2A10O95528 541 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 NGFRP08138 427 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 CSTF2P33240 577 aaKnown RBP eCLIP13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 RBM34P42696 430 aaKnown RBP13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 CTBP2P56545 445 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 FXYD6P3P58550 94 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 VBP1P61758 197 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 COPZ1P61923 177 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 FOXC1Q12948 553 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 DYNC1I2Q13409 638 aaKnown RBP13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 MED22Q15528 200 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 FNDC7Q5VTL7 733 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 ULK3Q6PHR2 472 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 TMPRSS11FQ6ZWK6 438 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 ANKRD37Q7Z713 158 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 ZNF440Q8IYI8 595 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 SLC34A3Q8N130 599 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 OR52I1Q8NGK6 324 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 NDNFQ8TB73 568 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 RPL3LQ92901 407 aaKnown RBP13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 RNFT2Q96EX2 444 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 TIMMDC1Q9NPL8 285 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 CARD8Q9Y2G2 431 aa13.36□□□□□ -0.27
PKNOX1-206ENST00000480179 HEATR5AQ86XA9 2040 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 KDM4EB2RXH2 506 aaPredicted RBP13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 GTPBP1O00178 669 aaKnown RBP13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 CDX4O14627 284 aaPredicted RBP13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 PRODHO43272 600 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 NCS1P62166 190 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 CRYZQ08257 329 aaKnown RBP13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 SKP2Q13309 424 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 ARMCX4Q5H9R4 360 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 APOOLQ6UXV4 268 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 FAM71CQ8NEG0 241 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 ANKK1Q8NFD2 765 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 OTULINQ96BN8 352 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 LGALS12Q96DT0 336 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 OMA1Q96E52 524 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 BCL7BQ9BQE9 202 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 ENKD1Q9H0I2 346 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 CLEC2DQ9UHP7 191 aa13.35□□□□□ -0.27
PKNOX1-206ENST00000480179 OR6C76A6NM76 312 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 GMFGO60234 142 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 ALOX12BO75342 701 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 RCBTB2O95199 551 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 RAB36O95755 333 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 HMGN1P05114 100 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 HBQ1P09105 142 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 TBXA2RP21731 343 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 GADD45AP24522 165 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 GRK5P34947 590 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 GPR143P51810 404 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 DOC2BQ14184 412 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 NCF4Q15080 339 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 TSTQ16762 297 aaKnown RBP13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 LCN10Q6JVE6 187 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 SMARCD3Q6STE5 483 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 THSD4Q6ZMP0 1018 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 SHFQ7M4L6 423 aa13.34□□□□□ -0.27
PKNOX1-206ENST00000480179 SLC46A3Q7Z3Q1 461 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms