RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	PGC	P20142	388 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	MYF6	P23409	242 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	RPP38	P78345	283 aa	Known RBP	10.22	□□□□□ -0.77
APTX-223	ENST00000479656	CBFB	Q13951	182 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	JMJD6	Q6NYC1	403 aa	Predicted RBP	10.22	□□□□□ -0.77
APTX-223	ENST00000479656	ISLR2	Q6UXK2	745 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	USP51	Q70EK9	711 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	RNF113B	Q8IZP6	322 aa	Known RBP	10.22	□□□□□ -0.77
APTX-223	ENST00000479656	BEST3	Q8N1M1	668 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	CLEC1A	Q8NC01	280 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	GPR119	Q8TDV5	335 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	MPP4	Q96JB8	637 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	HS6ST2	Q96MM7	605 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	MEPE	Q9NQ76	525 aa	Predicted RBP	10.22	□□□□□ -0.77
APTX-223	ENST00000479656	SDHAF3	Q9NRP4	125 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	C20orf141	Q9NUB4	165 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	MED31	Q9Y3C7	131 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	HRH3	Q9Y5N1	445 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	HEATR5A	Q86XA9	2040 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	EXPH5	Q8NEV8	1989 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656	FREM2	Q5SZK8	3169 aa		10.22	□□□□□ -0.77
APTX-223	ENST00000479656		A0A087WUJ7	227 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	WISP1	O95388	367 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	F10	P00742	488 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	CCL3	P10147	92 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	IFI30	P13284	250 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	OSM	P13725	252 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	POU1F1	P28069	291 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	SLC1A3	P43003	542 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	GPR4	P46093	362 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	ALDH6A1	Q02252	535 aa	Known RBP	10.21	□□□□□ -0.77
APTX-223	ENST00000479656	PRKCD	Q05655	676 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	COX10	Q12887	443 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	SLC22A10	Q63ZE4	541 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	TTC33	Q6PID6	262 aa	Predicted RBP	10.21	□□□□□ -0.77
APTX-223	ENST00000479656	MDGA2	Q7Z553	956 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	DND1	Q8IYX4	353 aa	Known RBP	10.21	□□□□□ -0.77
APTX-223	ENST00000479656	PARP8	Q8N3A8	854 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	PAQR8	Q8TEZ7	354 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	GABARAPL3	Q9BY60	117 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	LHPP	Q9H008	270 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	ADAM19	Q9H013	955 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	PPP4R1L	Q9P1A2	415 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656	WIF1	Q9Y5W5	379 aa		10.21	□□□□□ -0.77
APTX-223	ENST00000479656		A6NL46	340 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	BCKDK	O14874	412 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	SOX14	O95416	240 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	TP53	P04637	393 aa	Predicted RBP	10.21	□□□□□ -0.78
APTX-223	ENST00000479656	CCNA2	P20248	432 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	MAK	P20794	623 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	CHM	P24386	653 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	TACR3	P29371	465 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	RBM34	P42696	430 aa	Known RBP	10.21	□□□□□ -0.78
APTX-223	ENST00000479656	GSS	P48637	474 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	CRISP1	P54107	249 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	TSPAN31	Q12999	210 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	SNTA1	Q13424	505 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	RAPSN	Q13702	412 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	PTGES3	Q15185	160 aa	Known RBP	10.21	□□□□□ -0.78
APTX-223	ENST00000479656	QPRT	Q15274	297 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	ABHD17B	Q5VST6	288 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	TMEM236	Q5W0B7	351 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	KRT80	Q6KB66	452 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	POMZP3	Q6PJE2	187 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	UGT2A3	Q6UWM9	527 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	CD300LD	Q6UXZ3	194 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	ATG4D	Q86TL0	474 aa	Predicted RBP	10.21	□□□□□ -0.78
APTX-223	ENST00000479656	THAP4	Q8WY91	577 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	SECISBP2	Q96T21	854 aa	Known RBP	10.21	□□□□□ -0.78
APTX-223	ENST00000479656	ZNF426	Q9BUY5	554 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	ANGPTL4	Q9BY76	406 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	DSN1	Q9H410	356 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	PROK2	Q9HC23	129 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	SH2D2A	Q9NP31	389 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	TAS2R10	Q9NYW0	307 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	NDRG4	Q9ULP0	352 aa	Known RBP	10.21	□□□□□ -0.78
APTX-223	ENST00000479656	GMPPB	Q9Y5P6	360 aa		10.21	□□□□□ -0.78
APTX-223	ENST00000479656	ANKUB1	A6NFN9	424 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.2	□□□□□ -0.78
APTX-223	ENST00000479656	EIF4E1B	A6NMX2	242 aa	Known RBP	10.2	□□□□□ -0.78
APTX-223	ENST00000479656		E9PQ18	207 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656		G3V3Y1	287 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656		H3BN98	237 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	CDC42EP2	O14613	210 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	PNMT	P11086	282 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	GP1BB	P13224	206 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	FUT1	P19526	365 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	GSTM3	P21266	225 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	CYB561	P49447	251 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	HLCS	P50747	726 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	TPD52	P55327	224 aa	Predicted RBP	10.2	□□□□□ -0.78
APTX-223	ENST00000479656	ESRRG	P62508	458 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	OC90	Q02509	493 aa	Predicted RBP	10.2	□□□□□ -0.78
APTX-223	ENST00000479656	CRYZ	Q08257	329 aa	Known RBP	10.2	□□□□□ -0.78
APTX-223	ENST00000479656	ELOA3B	Q3SY89	546 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	SWT1	Q5T5J6	900 aa	Known RBP	10.2	□□□□□ -0.78
APTX-223	ENST00000479656	ZNF691	Q5VV52	312 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	SLC30A6	Q6NXT4	461 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	TMEM81	Q6P7N7	255 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	RTL4	Q6ZR62	310 aa		10.2	□□□□□ -0.78

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