RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	OIT3	Q8WWZ8	545 aa		13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	ST8SIA1	Q92185	356 aa		13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	CPNE4	Q96A23	557 aa	Predicted RBP	13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	ARL8A	Q96BM9	186 aa		13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	HS3ST6	Q96QI5	342 aa		13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	OR52B2	Q96RD2	323 aa		13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	OR52E6	Q96RD3	313 aa		13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	PANX1	Q96RD7	426 aa		13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	TMUB1	Q9BVT8	246 aa		13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	KLHL4	Q9C0H6	718 aa		13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	SLC6A13	Q9NSD5	602 aa		13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	NKIRAS1	Q9NYS0	192 aa		13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	FLNA	P21333	2647 aa	Known RBP	13.4	□□□□□ -0.26
CCNL1-222	ENST00000479596	CLDN24	A6NM45	220 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	GJE1	A6NN92	205 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	SLCO1B7	G3V0H7	640 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	CYP7B1	O75881	506 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	CHRM4	P08173	479 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	CD53	P19397	219 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	ENPP1	P22413	925 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	SESN3	P58005	492 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	MAPK11	Q15759	364 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	SYPL1	Q16563	259 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	DEFB113	Q30KQ7	82 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	COX20	Q5RI15	118 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	ATAD3B	Q5T9A4	648 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	FCRLA	Q7L513	359 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	NUFIP2	Q7Z417	695 aa	Known RBP	13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	TGIF2LY	Q8IUE0	185 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	TUSC5	Q8IXB3	177 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	SLC38A1	Q9H2H9	487 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	C12orf49	Q9H741	205 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	ZNF226	Q9NYT6	803 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	KLHL13	Q9P2N7	655 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	EDAR	Q9UNE0	448 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	SLC35A3	Q9Y2D2	325 aa		13.39	□□□□□ -0.27
CCNL1-222	ENST00000479596	ACAN	P16112	2415 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	IGHV3-15	A0A0B4J1V0	119 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	GCM2	O75603	506 aa	Predicted RBP	13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	PABPC4L	P0CB38	370 aa	Known RBP	13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	IDO1	P14902	403 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	MVD	P53602	400 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	RAC3	P60763	192 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	KEAP1	Q14145	624 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	RNPS1	Q15287	305 aa	Known RBP	13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	NXN	Q6DKJ4	435 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	C3orf33	Q6P1S2	294 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	TFAP2E	Q6VUC0	442 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	ZNF621	Q6ZSS3	439 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	PLEKHM3	Q6ZWE6	761 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	KRTAP1-3	Q8IUG1	177 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	OR9I1	Q8NGQ6	314 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	PIWIL2	Q8TC59	973 aa	Known RBP	13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	PNPT1	Q8TCS8	783 aa	Known RBP	13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	ZNF75CP	Q92670	426 aa	Predicted RBP	13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	PIK3IP1	Q96FE7	263 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	TRNT1	Q96Q11	434 aa	Known RBP	13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	ZBTB18	Q99592	522 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	CCDC106	Q9BWC9	280 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	TIGAR	Q9NQ88	270 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	ACER3	Q9NUN7	267 aa		13.38	□□□□□ -0.27
CCNL1-222	ENST00000479596	SMAD9	O15198	467 aa	Known RBP	13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	KLF4	O43474	513 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	SLC22A3	O75751	556 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	PGC	P20142	388 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	RPS4Y1	P22090	263 aa	Known RBP	13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	SLC7A1	P30825	629 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	KCNJ10	P78508	379 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	LRRC74A	Q0VAA2	488 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	MERTK	Q12866	999 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	GPAT3	Q53EU6	434 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	AGBL2	Q5U5Z8	902 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	GTF2IRD2B	Q6EKJ0	949 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	BEND4	Q6ZU67	534 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	GTF2IRD2	Q86UP8	949 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	CXorf67	Q86X51	503 aa	Predicted RBP	13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	GABRG1	Q8N1C3	465 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	TRIML2	Q8N7C3	387 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	CNOT9	Q92600	299 aa	Known RBP	13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	REXO5	Q96IC2	774 aa	Known RBP	13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	PSD2	Q9BQI7	771 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	BCO1	Q9HAY6	547 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	GP6	Q9HCN6	339 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	EXOSC3	Q9NQT5	275 aa	Known RBP	13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	ZIM2	Q9NZV7	527 aa		13.37	□□□□□ -0.27
CCNL1-222	ENST00000479596	C2CD3	Q4AC94	2353 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	UQCRHL	A0A096LP55	91 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	AGAP5	A6NIR3	686 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	RFXANK	O14593	260 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	AP3D1	O14617	1153 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	PRKD3	O94806	890 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	IL6	P05231	212 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	PSMB1	P20618	241 aa	Known RBP	13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	EDNRA	P25101	427 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	ADAM8	P78325	824 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	TXNL4A	P83876	142 aa	Known RBP	13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms