RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 DLL4Q9NR61 685 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 KCNE3Q9Y6H6 103 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 RNF103-CHMP3A0A140T963 221 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 GJE1A6NN92 205 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 UBDO15205 165 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 FOSL1P15407 271 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 PPP3CBP16298 524 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 IL11P20809 199 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 ADH6P28332 368 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 SHC1P29353 583 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 AGTR1P30556 359 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 ATP4BP51164 291 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 CLDN8P56748 225 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 CARD18P57730 90 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 RPS26P62854 115 aaKnown RBP12.81□□□□□ -0.36
ATG4B-218ENST00000479554 NKX6-1P78426 367 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-218ENST00000479554 SQLEQ14534 574 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 ZNF239Q16600 458 aaKnown RBP12.81□□□□□ -0.36
ATG4B-218ENST00000479554 SMU1Q2TAY7 513 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 NDUFAF6Q330K2 333 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 GTF2IRD2BQ6EKJ0 949 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 GTF2IRD2Q86UP8 949 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 CXorf67Q86X51 503 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-218ENST00000479554 FBXO27Q8NI29 283 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 CPNE4Q96A23 557 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-218ENST00000479554 REXO5Q96IC2 774 aaKnown RBP12.81□□□□□ -0.36
ATG4B-218ENST00000479554 SLC35G5Q96KT7 338 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 BTBD10Q9BSF8 475 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 AKTIPQ9H8T0 292 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 TIGARQ9NQ88 270 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 ICAM5Q9UMF0 924 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 DTNAQ9Y4J8 743 aa12.81□□□□□ -0.36
ATG4B-218ENST00000479554 GPC6Q9Y625 555 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-218ENST00000479554 B2RBV5 119 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 NPIPB9F8W1W9 429 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 AK1P00568 194 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 PABPC4LP0CB38 370 aaKnown RBP12.8□□□□□ -0.36
ATG4B-218ENST00000479554 UBL4AP11441 157 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 COX4I1P13073 169 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 LBPP18428 481 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 FPR1P21462 350 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 HOXC12P31275 282 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 CCR4P51679 360 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 SHEQ5VZ18 495 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 OR4F3Q6IEY1 312 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 STAC2Q6ZMT1 411 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 BEND4Q6ZU67 534 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 SPATA19Q7Z5L4 167 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 CLECL1Q8IZS7 167 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 TOR1AIP2Q8NFQ8 470 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 OR4A15Q8NGL6 344 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 RNF128Q8TEB7 428 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 ROBO4Q8WZ75 1007 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 PIGTQ969N2 578 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 MARK4Q96L34 752 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 HS3ST6Q96QI5 342 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 PIP5K1AQ99755 562 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 DPY30Q9C005 99 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 C12orf49Q9H741 205 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 ACANP16112 2415 aa12.8□□□□□ -0.36
ATG4B-218ENST00000479554 DUXAA6NLW8 204 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 RNASET2O00584 256 aaKnown RBP12.79□□□□□ -0.36
ATG4B-218ENST00000479554 GYG2O15488 501 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 ZNF264O43296 627 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 ARHGEF9O43307 516 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 SMPD2O60906 423 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 THBDP07204 575 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 PRKCAP17252 672 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 MATN1P21941 496 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 LOXP28300 417 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-218ENST00000479554 STX1BP61266 288 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 SELENBP1Q13228 472 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 CBFBQ13951 182 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 RNPS1Q15287 305 aaKnown RBP12.79□□□□□ -0.36
ATG4B-218ENST00000479554 MAPRE2Q15555 327 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 TOMM34Q15785 309 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-218ENST00000479554 ACKR1Q16570 336 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 BEX5Q5H9J7 111 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 TMEM201Q5SNT2 666 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 PDZK1Q5T2W1 519 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 OGFOD2Q6N063 350 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 C20orf204Q6ZNR8 217 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 RINLQ6ZS11 566 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 C22orf34Q6ZV56 151 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 C16orf62Q7Z3J2 963 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 C6orf120Q7Z4R8 191 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 KRTAP1-3Q8IUG1 177 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 P3H2Q8IVL5 708 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 ATP6V1C2Q8NEY4 427 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 OR5W2Q8NH69 310 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 RP9Q8TA86 221 aaKnown RBP12.79□□□□□ -0.36
ATG4B-218ENST00000479554 GPR119Q8TDV5 335 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 ZFP90Q8TF47 636 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 ABHD3Q8WU67 409 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 MRGPRX4Q96LA9 322 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 SDF2Q99470 211 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 CCL19Q99731 98 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 SRXN1Q9BYN0 137 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 C1orf21Q9H246 121 aa12.79□□□□□ -0.36
ATG4B-218ENST00000479554 SERHL2Q9H4I8 314 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms