RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 GPR83Q9NYM4 423 aa11.12□□□□□ -0.63
PCCB-214ENST00000478469 ZNF879B4DU55 563 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 LOC110117498-PIK3R3F6TDL0 507 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 STMND1H3BQB6 276 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 PLOD2O00469 737 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 MSX1P28360 303 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 RPS5P46782 204 aaKnown RBP11.11□□□□□ -0.63
PCCB-214ENST00000478469 CLPPQ16740 277 aaPredicted RBP11.11□□□□□ -0.63
PCCB-214ENST00000478469 ODF4Q2M2E3 257 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 C5orf46Q6UWT4 87 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 ZER1Q7Z7L7 766 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 D2HGDHQ8N465 521 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 ZNF283Q8N7M2 679 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 C2orf42Q9NWW7 574 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 PILRBQ9UKJ0 227 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 SATB2Q9UPW6 733 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 SVILO95425 2214 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 AGAP5A6NIR3 686 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 A6NIZ1 184 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 CLCA1A8K7I4 914 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 H3BSA7 217 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 CCRL2O00421 344 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 DDAH2O95865 285 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 GASTP01350 101 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 H2BFMP0C1H6 154 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 DAP3P51398 398 aaKnown RBP11.11□□□□□ -0.63
PCCB-214ENST00000478469 RAP1BP61224 184 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 RAP1AP62834 184 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 DUSP8Q13202 625 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 C1orf94Q6P1W5 598 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 FAM199XQ6PEV8 388 aaPredicted RBP11.11□□□□□ -0.63
PCCB-214ENST00000478469 XKR5Q6UX68 686 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 FAM131AQ6UXB0 335 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 VN1R1Q9GZP7 353 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 DCSTAMPQ9H295 470 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 ABCB9Q9NP78 766 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 SEMA4GQ9NTN9 838 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 RNF6Q9Y252 685 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 A0A1W2PR77 199 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 PRKNO60260 465 aaPredicted RBP11.11□□□□□ -0.63
PCCB-214ENST00000478469 SP9P0CG40 484 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 ACP2P11117 423 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 S1PR1P21453 382 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 CRABP1P29762 137 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 ZNF846Q147U1 533 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 PWWP2BQ6NUJ5 590 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 DHRS4L2Q6PKH6 230 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 TBPL2Q6SJ96 375 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 QSOX2Q6ZRP7 698 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 MBOAT2Q6ZWT7 520 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 RBM45Q8IUH3 476 aaKnown RBP11.11□□□□□ -0.63
PCCB-214ENST00000478469 TMEM178AQ8NBL3 297 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 TTYH2Q9BSA4 534 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 ANKRD19PQ9H560 264 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 SLC6A13Q9NSD5 602 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 SIDT1Q9NXL6 827 aaKnown RBP11.11□□□□□ -0.63
PCCB-214ENST00000478469 YARS2Q9Y2Z4 477 aaKnown RBP11.11□□□□□ -0.63
PCCB-214ENST00000478469 DOCK4Q8N1I0 1966 aa11.11□□□□□ -0.63
PCCB-214ENST00000478469 C2orf72A6NCS6 295 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 PRODHO43272 600 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 TBX1O43435 398 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 SUSD5O60279 629 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 IGLV3-19P01714 112 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 PAX7P23759 505 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 ELAVL4P26378 380 aaKnown RBP11.1□□□□□ -0.63
PCCB-214ENST00000478469 POLR2IP36954 125 aaKnown RBP11.1□□□□□ -0.63
PCCB-214ENST00000478469 EIF1P41567 113 aaKnown RBP11.1□□□□□ -0.63
PCCB-214ENST00000478469 OVCH1Q7RTY7 1134 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 GDF7Q7Z4P5 450 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 SLC25A45Q8N413 288 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 WDR12Q9GZL7 423 aaKnown RBP11.1□□□□□ -0.63
PCCB-214ENST00000478469 ZNF696Q9H7X3 374 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 SIRT5Q9NXA8 310 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 MED11Q9P086 117 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 CCL27Q9Y4X3 112 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 PEX16Q9Y5Y5 336 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 TMED7-TICAM2A0A0A6YYA0 188 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 ASPDHA6ND91 283 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 CHMP24386 653 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 GABREP78334 506 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 MAD2L1BPQ15013 274 aaPredicted RBP11.1□□□□□ -0.63
PCCB-214ENST00000478469 QPRTQ15274 297 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 SF3B4Q15427 424 aaKnown RBP eCLIP11.1□□□□□ -0.631e-6■■■■□ 24.6
PCCB-214ENST00000478469 HES3Q5TGS1 186 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 GPR139Q6DWJ6 353 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 HMBOX1Q6NT76 420 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 MZT2BQ6NZ67 158 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 ZNF367Q7RTV3 350 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 SDR9C7Q8NEX9 313 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 OR13C2Q8NGS9 318 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 RBM24Q9BX46 236 aaKnown RBP11.1□□□□□ -0.63
PCCB-214ENST00000478469 SLAMF7Q9NQ25 335 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 SEC14L4Q9UDX3 406 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 TMED7Q9Y3B3 224 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 NOX1Q9Y5S8 564 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 GPC6Q9Y625 555 aaPredicted RBP11.1□□□□□ -0.63
PCCB-214ENST00000478469 A0A1B0GVI7 797 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 CHP2O43745 196 aa11.1□□□□□ -0.63
PCCB-214ENST00000478469 PEBP1P30086 187 aaKnown RBP11.1□□□□□ -0.63
PCCB-214ENST00000478469 MAP2K4P45985 399 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms